Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun9g00591 ATGGCATCTGATCTGAATTCGGGGTTGTCCAAGAAAACTTTTGTCTTTGGTTTGAAAGTGTGGGTACTAATGGGAATACTAGTTGGGTTATTCATTGTAATCATTCTTGTGGTGCTATCAATATGTCTCACTTTAAGAAAGAAATTCAGAAGAGTAAATGGCAAGCTTCCACTTAGCCATGTGTTAGCTATTTCAGAAGAGATCAAAGAAATCAGAGTTGATCAAGTTTCAGCAAATAATCATCCACAGAATGGTACTTTTATGAGTCTGAATGACAAATTTGGTGAAGGGGAGACTGAAAAGGTTATGAACCAAACACAGAATGGGGACAATAGTAGTCAATCAGGCTCCTTTAATCATGTAGAGAAAGATGGCAATGGCTCTCAATCAGGTGAAGAAAATGGTGCTAAGGGAATTGCTTCTTATAGGTCTTCTTTGCATCCTATAACCGCACCATCCCCTTTGTCTGGTTTGCCGGAATTCTCACAGCTTGGCTGGGGCCACTGGTTTACACTAAGGGACCTAGAACTTGCTACGAACAGATTTTCAAAAGAAAATGTTATTGGGGAAGGTGGATATGGAATTGTTTATCGTGGTCAATTAATCAATGGTAGTCCTGTGGCCATCAAGAAGCTCCTCAACAATTTAGGACAAGCTGAAAAGGAATTCAGGGTGGAAGTTGAGGCTATTGGTCATGTACGGCATAAGAACTTAGTTCGACTTCTGGGCTACTGCATTGAAGGCACTCATAGGTTGTTGATTTATGAGTATGTTAACAATGGCAATTTAGAGCAGTGGCTTCATGGGGCCATGCGGCAGCATGGTTTTCTTACTTGGGATGCTCGGATAAAAATTCTCCTTGGAACAGCCAAAGCGCTGGCTTATTTGCATGAGGCAATTGAGCCAAAAGTTGTGCATAGAGATATTAAGTCGAGCAACATTCTAATTGATGAGGACTTTAATGCCAAAATATCTGACTTTGGGCTGGCCAAGTTACTCGGTGCTGGAAAAAGTCATATTACAACCAGAGTTATGGGTACTTTTGGATATGTAGCTCCAGAATATGCCAATTCTGGCTTGCTAAATGAGAAGAGTGATGTTTACAGCTTTGGGGTATTGCTCCTTGAAGCAATTACAGGAAGAGACCCTGTGGATTATAGTCGACCAGCAACCGAGGTAAATTTGGTGGACTGGCTCAAGATGATGGTAGGTTTTCGACGCTCAGAAGAGGTGTTGGATCCCAACATTGAGACCAGGCCATCGACAAGCGCCCTTAAACGAGCCCTCTTGACAGCTCTGAGGTGTGTTGATCCAGATGCAGAAAAAAGACCAAGAATGAGCCAAGTTGTCCGCATGCTTGAATCAGAGGAATATCCTATACCACGAGAGGATCGAAGACGGCGGAAGAGTCAGGCCGGAAACATGGAGGTGGAGACTCACTCTGATACAGATAAGAGTGACAATACAGATTACAAGTCCAATGGCAGAAGGAACCAATGTGTGTAG 1506 0.4276 MASDLNSGLSKKTFVFGLKVWVLMGILVGLFIVIILVVLSICLTLRKKFRRVNGKLPLSHVLAISEEIKEIRVDQVSANNHPQNGTFMSLNDKFGEGETEKVMNQTQNGDNSSQSGSFNHVEKDGNGSQSGEENGAKGIASYRSSLHPITAPSPLSGLPEFSQLGWGHWFTLRDLELATNRFSKENVIGEGGYGIVYRGQLINGSPVAIKKLLNNLGQAEKEFRVEVEAIGHVRHKNLVRLLGYCIEGTHRLLIYEYVNNGNLEQWLHGAMRQHGFLTWDARIKILLGTAKALAYLHEAIEPKVVHRDIKSSNILIDEDFNAKISDFGLAKLLGAGKSHITTRVMGTFGYVAPEYANSGLLNEKSDVYSFGVLLLEAITGRDPVDYSRPATEVNLVDWLKMMVGFRRSEEVLDPNIETRPSTSALKRALLTALRCVDPDAEKRPRMSQVVRMLESEEYPIPREDRRRRKSQAGNMEVETHSDTDKSDNTDYKSNGRRNQCV 501
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun9g00591 501 MobiDBLite consensus disorder prediction 454 492 - -
Viun9g00591 501 ProSitePatterns Serine/Threonine protein kinases active-site signature. 304 316 IPR008271 GO:0004672|GO:0006468
Viun9g00591 501 FunFam Putative receptor-like protein kinase 164 257 - -
Viun9g00591 501 CDD STKc_IRAK 188 454 - -
Viun9g00591 501 MobiDBLite consensus disorder prediction 101 135 - -
Viun9g00591 501 SMART serkin_6 182 453 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun9g00591 501 Gene3D Phosphorylase Kinase; domain 1 162 257 - -
Viun9g00591 501 PANTHER OS01G0323000 PROTEIN 4 480 - -
Viun9g00591 501 ProSiteProfiles Protein kinase domain profile. 182 459 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun9g00591 501 Pfam Protein kinase domain 183 451 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun9g00591 501 MobiDBLite consensus disorder prediction 454 501 - -
Viun9g00591 501 SUPERFAMILY Protein kinase-like (PK-like) 166 464 IPR011009 -
Viun9g00591 501 MobiDBLite consensus disorder prediction 101 136 - -
Viun9g00591 501 Gene3D Transferase(Phosphotransferase) domain 1 258 470 - -
Viun9g00591 501 ProSitePatterns Protein kinases ATP-binding region signature. 188 211 IPR017441 GO:0005524
Viun9g00591 501 FunFam Putative receptor-like serine/threonine-protein kinase 258 469 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun9g00591 Viun-Chr9 4345574 4350605 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun9g00591 17 456 Trihelix Transcription Factor Family AT1G70460 40.225 5.03e-95 301
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-V Viun9g00591 Pkinase 5.4e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun9g00591 - - vum:124826827 957.977