Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Viun9g00560 | ATGGAAGAAAAATCTTCGTTAAAAAATTTGCTGAAAGAAGAAGAAAGACCAGGGAACGGAACCGATCACAACACTATGGGATCCAGTGTTCTCTCCTTGAGCCTGAATAACTCTGGACAGCCCTTGAACCAAATGGGCATGCTGAGAATCAAACTTGAAGAAGCTAAGAAAGAGAATGAAATCTTGAAGGCGATGCTAACTCAGGTTAATGAACACTGCACTGTTCTTCAGAATCGAATACTTTTTGAGATGCAGCAACATCAACTCTCTTCATCAAATAAAAACAATAATCATCAGTCGCAGGGAAAAATACAAGGTTTGGAGAAACCAGTGCTACACACTCGGCAGTTTTTGAATATTGGTGATTGTTCTTCAGTTTCAGAGGGTTACACAGAAAACGTTGAAAAGAAAATATTCGGTGAAGGTGAAATGAACACAAAAATAGCATTGCATGAAGCAAAATGCATAGAAGATCAAGCATCTGAGGTTACTTGCAGAAGAGCTAAAGTATCCATAAGAGCACGATCAGATTTTTCTTTGATGGGAGATGGGTGTCAATGGAGAAAGTATGGACAAAAGACCGCCAAAGGCAATCCTTGTCCCAGAGCCTACTACCGTTGTAGCATGGGCACTGCATGTCCAGTTCGTAAACAGGTGCAGAGATGTTTCAAGGACGAGACTGTTCTGATCACTACCTACGAAGGGAGCCACAACCACCCACTCCCAGTAGCAGCCAGATCTTTCGCAAGCTCAACATCAGCAGCATTGAACATGTTCCTTTCTGGTTCACTCACAAGTTCAGGTGGCAGCACCACTCTACCAAACTCACCCCTCTTCTCTTCATCACTGTCTTCTATTTCCCCAACTGCAGTAGCCACCTTCTCCCACAGTGCAACATGTCCCACAGTAACACTGGATCTGACTCACCCCAACAACAACACCAATAACTATCTCCACTTCCAAAGGGCCACCACCACCACCACTTCACACCCTTTGTTCCCTCTCCCACTGCATGGCCACCCTCATGAAGGGTTGCCCTTATTGTGTTCCAAAGTCCCAACCTTTCTGGACAAAAACCTTGCATTGGTGGATGTTGTTAGTGAGGCCATAACCAAAGACCCTTCTCTGAAGGCAGCACTTTTTTCAGCCATTTCCTCACTCACTGCAGATCCTCAGAAGAACAGCAATAACCTCAGCCAACACAGTAAAAGTAGCAGTGGTTATGACCCTTGTTCTAAGATGCCTGCAATACCACCTCACCAGCCTTACACTACTGAGTTGATATAG | 1287 | 0.4452 | MEEKSSLKNLLKEEERPGNGTDHNTMGSSVLSLSLNNSGQPLNQMGMLRIKLEEAKKENEILKAMLTQVNEHCTVLQNRILFEMQQHQLSSSNKNNNHQSQGKIQGLEKPVLHTRQFLNIGDCSSVSEGYTENVEKKIFGEGEMNTKIALHEAKCIEDQASEVTCRRAKVSIRARSDFSLMGDGCQWRKYGQKTAKGNPCPRAYYRCSMGTACPVRKQVQRCFKDETVLITTYEGSHNHPLPVAARSFASSTSAALNMFLSGSLTSSGGSTTLPNSPLFSSSLSSISPTAVATFSHSATCPTVTLDLTHPNNNTNNYLHFQRATTTTTSHPLFPLPLHGHPHEGLPLLCSKVPTFLDKNLALVDVVSEAITKDPSLKAALFSAISSLTADPQKNSNNLSQHSKSSSGYDPCSKMPAIPPHQPYTTELI | 428 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Viun9g00560 | 428 | MobiDBLite | consensus disorder prediction | 1 | 37 | - | - | |
Viun9g00560 | 428 | SMART | WRKY_cls | 181 | 241 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Viun9g00560 | 428 | MobiDBLite | consensus disorder prediction | 391 | 428 | - | - | |
Viun9g00560 | 428 | SUPERFAMILY | WRKY DNA-binding domain | 174 | 242 | IPR036576 | GO:0003700|GO:0006355|GO:0043565 | |
Viun9g00560 | 428 | MobiDBLite | consensus disorder prediction | 1 | 20 | - | - | |
Viun9g00560 | 428 | MobiDBLite | consensus disorder prediction | 21 | 37 | - | - | |
Viun9g00560 | 428 | Pfam | WRKY DNA -binding domain | 183 | 240 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Viun9g00560 | 428 | ProSiteProfiles | WRKY domain profile. | 176 | 242 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Viun9g00560 | 428 | MobiDBLite | consensus disorder prediction | 391 | 409 | - | - | |
Viun9g00560 | 428 | Coils | Coil | 45 | 72 | - | - | |
Viun9g00560 | 428 | PANTHER | WRKY TRANSCRIPTION FACTOR 36-RELATED | 42 | 397 | IPR044810 | GO:0003700 | |
Viun9g00560 | 428 | Gene3D | WRKY domain | 166 | 243 | IPR036576 | GO:0003700|GO:0006355|GO:0043565 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Viun9g00560 | Viun-Chr9 | 4207272 | 4212499 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Viun9g00560 | 48 | 308 | WRKY Transcription Factor Family | AT4G04450 | 40.909 | 6.37e-63 | 207 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | WRKY | Viun9g00560 | WRKY | 1.2e-22 | CL0274 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Viun9g00560 | - | - | gmx:100781603 | 531.561 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Viun9g00560 | 9 | 4207272 | 4212499 | Viun3g05539 | 3 | 61241677 | 61245546 | PCT |