Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun9g00549 ATGGTTGGCTCTGTCACTGTCAAGTCCGAGGTTTCCCTTCTGGAATCTTCTCCCTCTCCTGTGGAGAAACCTGAAGGAGTTTGTTCCAACATGGATGAACACCACCTGGTCCAACCCAATATGAATGACTCCTCAACCAAGAAGTCAGTGCCAGCCTCTGGACTTAATGCAGTGATTCCTAGTACAAACCAGCTTACCATCTTCTACAATGGGAGTGTTTGTGTCTATGATGGAATCCCTGCAGAAAAGGTGCATGAAATAATGCTTATTGCTGCTGCTGCTGCCAAGTCTACTGAAATGAAGAAGATTGGGACCCAATCTACCCTCATTTCACCTGTTCCCACAAGGCCTTCTTCTCCTCATGGAATCACCAACAATGTTGCTGCCTCACAGAAGAATTCCATCTGCAGGCTGCAAGAATTTCCAATAGCACGCAGGCATTCACTTCAAAGGTTTCTTGAGAAGCGGCGAGATAGGCTGGGTAGCAAAGCTCCTTATCCTTCCTCATCAACCACTAAAGTGGCTGATAACATAGAGAACAACTTCTGTGCTGACAATGCCCCAGAGCTGATTTCCCTGAATCGAGCAGAGGAGGAATTTCATCCAACTGTCTCTGCCTCTTGA 624 0.4679 MVGSVTVKSEVSLLESSPSPVEKPEGVCSNMDEHHLVQPNMNDSSTKKSVPASGLNAVIPSTNQLTIFYNGSVCVYDGIPAEKVHEIMLIAAAAAKSTEMKKIGTQSTLISPVPTRPSSPHGITNNVAASQKNSICRLQEFPIARRHSLQRFLEKRRDRLGSKAPYPSSSTTKVADNIENNFCADNAPELISLNRAEEEFHPTVSAS 207
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun9g00549 207 ProSiteProfiles Tify domain profile. 58 93 IPR010399 -
Viun9g00549 207 PANTHER PROTEIN TIFY 4A-RELATED-RELATED 34 175 IPR040390 -
Viun9g00549 207 SMART tify_2 58 93 IPR010399 -
Viun9g00549 207 MobiDBLite consensus disorder prediction 1 16 - -
Viun9g00549 207 Pfam Jas motif 142 166 IPR018467 -
Viun9g00549 207 MobiDBLite consensus disorder prediction 1 25 - -
Viun9g00549 207 Pfam tify domain 60 92 IPR010399 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun9g00549 Viun-Chr9 4087077 4090894 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun9g00549 63 173 Tify Gene Family AT5G20900 52.101 1.59e-27 101
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Tify Viun9g00549 tify 1.4e-17 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun9g00549 K13464 - gmx:100306045 330.102
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun3g05515 3 61051567 61054022 Viun9g00549 9 4087077 4090894 PCT