Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun9g00530 ATGGCATCTTCGGAGAATGAACCTTCTTCTCACTCTTCACCTCCTCCTCCTCCCGCAAATATTTGTATGCAAAAGTTCCGGCTATATGAGACTCTATCGAACTTTTACATGATAGGAAGGGACAAGAGCAGGACTTATTGGAAAGTGTTAAAAATTGACCGTCTAGAGCCATCCGAGCTGAGTGTGCTTGAAGATTCCACCACATACACAGAAAGTGAATGTTCTGATCTGTTGAGACGTATACATGAGGGGAATAGGTCCACAGGTGGACTGAAATTTGTTACAACTTGTTATGGAATTATTGGGTTCATAAAATTTTTAGGGCCATACTACATGGTGGTCATCACAAAAAGAAGGAAAATTGGTGCAATCTGTGGTCATACAGTATATGCTGTCTCAAAGAGTGAGATGATTTCACTGCAAAATCCTTCTGTTCAATCTAACATCGATGAAAACAGATACAAGAAGCTTCTATTAACGGTTGACCTTACGAAGGATTTCTATTTTAGCTACTCATACTGTATCATGCGTAGTCTTCAAAGGAATTTGTGTGATAGTGAAACAAGCCACGTCCTTTATGAGACCATGTTTGTCTGGAATGAGTTTTTGACTCGAGGAATTAGGAATCACCTCCAGAATACTATTTGGACAGTTGCACTGATATACGGCTTTTTTAAACAGGAAACACTTGCAATATCTGGGCGGGAGTTCATTCTTACTCTCATTGCACGACGATCTCGCCATTATGCTGGTACTAGGTATTTGAGACGAGGATTAAATGACAAGGGTAGAGTAGCAAATGATGTGGAGACAGAGCAAATTGTATTTGAGGATGTTCCTGAAGGTCTTCCCGTCCAAATATGCTCTGTTGTCCAGAATCGGGGTTCAATCCCCCTGTTCTGGTCACAGGAAACTTCACGTCTGAATCTTAAGCCTGATATCATATTGTCAAAGAAAGATCAGAATTATCAAGCCACCAAACTTCACTTTGAAGATCTCGTCAAAAGATATGGGAATCCCATAATAATTTTGAATTTGATAAAGTCACATGAGAGGAAGCCTCGCGAGTCCATTCTTCGTTCTGAGTTTGGTAATGCCATCAATTTCATTAACAAAGATTTATCAAAGGAGAACAAATTGAGGTTTCTTCATTGGGATCTTAAACATTTTCAGAGCAAAGCTACAAATGTTTTACTACTTCTGGGGAAAGTGGCTACATATGCTTTAACATTAACAGGTTTTTTATATTGCCAAGTGTCACCAACTTCTAGACTCGAAGAATGTATAGAAAGACCACCTATTGATTTCGCATATGACAATATTGATAAGGGAAGCTTTCAACCCACGAGACATGTTGATGTTGACAATGAAGATGGAAATAATTTAGAGAGGAAACCTAGTGGAGAAGACAACCATGCTAACGGAAATCATTTTGTTAAGTCACCCATGTTCCAGAGGGGGGTTCTTCGAACTAATTGTATAGACTGCTTAGATCGCACTAATGTTGCACAATATGCATATGGGTTGGCTGCTCTTGGCCACCAGCTTCATGCTCTGGGAATTATTGACCACCTGAAAATTGACCTTGATGATCCTGTAAGTGATGATTTGATGGGATTTTATGAGCGGATGGGTGACACTCTTGCACATCAGTATGGTGGTTCTGCTGCACATAAGAAGATATTCTCTCAGAGGAGGGGACAATGGAAAGCTGCAACACAATCCCAGGAGTTCTTTAGGACTCTTCAACGATATTACAGCAATGCTTACATGGATGCTGAGAAGCAAAATGCAATTAACATATTCCTGGGGCATTTTCAGCCCCAAGTGGGTAAGCCTGCTCTATGGGATTTGGGTTCAGATCAACATTATGATATAGGGAGACATGGGGATGATGATGCAAGGTCATTTGTCAAAAGGTGTTTCTCGGATGGAAGCATCATTCATGGCAGGTTTCCTACGTCATCCCCAAATCCAAATATTGAAAAATTCTCAAAGCTAGGTTTGCAGAACCACTCAGAAGAAGGAAACAATGATTTTTGTGACTCATTTGCTGAAATTTCAACATTTGAGAGTGACATCGCATTTTCAAGGTACGCTCCCACATTGCCTCGTCGACAGCTTTTTGGAGACGCACCAAGAGAGCGGTACATTGATAGTGAACATATTTCACATTCTGCACATGAGGTCTCATTCAGCAGTTCCAACTTTCTTGACCTGGATTGGCTGTCTTCTTCAGCAAATTCATGTGAAGAAGAGCCATTTGAAAGGTTTTCAATTGCCAATTCTTCTATTGCTGGGAGTTCTTCAGAAAATGTTATTAATGGAGTTATTATCGGAGGAGATACTCCCTCCACCAGCGTTCTAGACTCAAACACTAAGGGAAGAGAGCGAACTGGGTCAGAGTTATCCCACCGTGATGCCCAGTCCAAAGTTCTAGAGGAATATCCTGATACTTTTGTACAATGGGTGAATAATGGACAGACACTTTGCAATTGA 2499 0.4066 MASSENEPSSHSSPPPPPANICMQKFRLYETLSNFYMIGRDKSRTYWKVLKIDRLEPSELSVLEDSTTYTESECSDLLRRIHEGNRSTGGLKFVTTCYGIIGFIKFLGPYYMVVITKRRKIGAICGHTVYAVSKSEMISLQNPSVQSNIDENRYKKLLLTVDLTKDFYFSYSYCIMRSLQRNLCDSETSHVLYETMFVWNEFLTRGIRNHLQNTIWTVALIYGFFKQETLAISGREFILTLIARRSRHYAGTRYLRRGLNDKGRVANDVETEQIVFEDVPEGLPVQICSVVQNRGSIPLFWSQETSRLNLKPDIILSKKDQNYQATKLHFEDLVKRYGNPIIILNLIKSHERKPRESILRSEFGNAINFINKDLSKENKLRFLHWDLKHFQSKATNVLLLLGKVATYALTLTGFLYCQVSPTSRLEECIERPPIDFAYDNIDKGSFQPTRHVDVDNEDGNNLERKPSGEDNHANGNHFVKSPMFQRGVLRTNCIDCLDRTNVAQYAYGLAALGHQLHALGIIDHLKIDLDDPVSDDLMGFYERMGDTLAHQYGGSAAHKKIFSQRRGQWKAATQSQEFFRTLQRYYSNAYMDAEKQNAINIFLGHFQPQVGKPALWDLGSDQHYDIGRHGDDDARSFVKRCFSDGSIIHGRFPTSSPNPNIEKFSKLGLQNHSEEGNNDFCDSFAEISTFESDIAFSRYAPTLPRRQLFGDAPRERYIDSEHISHSAHEVSFSSSNFLDLDWLSSSANSCEEEPFERFSIANSSIAGSSSENVINGVIIGGDTPSTSVLDSNTKGRERTGSELSHRDAQSKVLEEYPDTFVQWVNNGQTLCN 832
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun9g00530 832 ProSiteProfiles Sac phosphatase domain profile. 158 554 IPR002013 GO:0016791
Viun9g00530 832 PANTHER POLYPHOSPHOINOSITIDE PHOSPHATASE 10 823 IPR043573 GO:0043813|GO:0046856
Viun9g00530 832 MobiDBLite consensus disorder prediction 784 808 - -
Viun9g00530 832 Pfam SacI homology domain 98 389 IPR002013 GO:0016791
Viun9g00530 832 MobiDBLite consensus disorder prediction 449 476 - -
Viun9g00530 832 MobiDBLite consensus disorder prediction 449 471 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun9g00530 Viun-Chr9 3888039 3902239 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun9g00530 22 832 Acyl Lipid Metabolism Gene Families AT5G20840 58.738 0.0 933
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun9g00530 K22913 - gmx:100786438 1396.33
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun9g00530 9 3888039 3902239 Viun9g03216 9 39292529 39317293 ECH
Viun9g00530 9 3888039 3902239 Viun9g00530 9 3888039 3902239 ECH
Viun3g05495 3 60874818 60883953 Viun9g00530 9 3888039 3902239 PCT