Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun9g00525 ATGGATAGCGGTGTAGGGTACAAATTAACAGGGATTAGGCAGATAGTGAGGTTAAAGGAAATGCTGCAGAAATGGCAGAACGTGACTTTAGGGCAAAAAGCTTCGATCCCCACCATTTCTGATCAAGTGCCTAATAACGATGGAAGTGGATTGCCACTGATAAACAAAAGGGTAGTGAATATTATGAACACCGAATCTGACACAGAAGATAGCTGCCAAAGTCCTGAACCGCTTCCACCACCCGACGTTCCAAAGGGATACTTGGCAGTGTATGTTGGACCTGAGCTTCGAAGGTTCATCATTCCCACCACTTATCTCAGCCACTCTCTCTTCAAAGTTTTGCTCGAAAAAGCTGCAGACGAATTTGGCTTTGATCACAGTGGAGCCCTCACCATCCCTTGTGAAACTGAGACCTTCAAGTACCTACTCAAGTGCATCGAGAATCAGCAGAAAGACCAACTCAATGATAAAACTTCACAACCTGAAAGCTCGGGAACTGTGGAAGAGTAA 510 0.451 MDSGVGYKLTGIRQIVRLKEMLQKWQNVTLGQKASIPTISDQVPNNDGSGLPLINKRVVNIMNTESDTEDSCQSPEPLPPPDVPKGYLAVYVGPELRRFIIPTTYLSHSLFKVLLEKAADEFGFDHSGALTIPCETETFKYLLKCIENQQKDQLNDKTSQPESSGTVEE 169
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun9g00525 169 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 67 142 IPR003676 GO:0009733
Viun9g00525 169 Pfam Auxin responsive protein 78 146 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun9g00525 Viun-Chr9 3844447 3846209 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun9g00525 1 152 Calmodulin-binding Proteins AT3G43120 67.105 5.17e-70 207
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun9g00525 K14488 - gmx:100527570 256.914
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun9g00525 9 3844447 3846209 Viun9g00525 9 3844447 3846209 ECH
Viun3g05484 3 60771769 60773273 Viun9g00525 9 3844447 3846209 PCT