Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun9g00520 ATGCACCTCCAAATCTCACTCTCAATGCTTCTACTCTCTGTTTTCTTAACATCTCCAACGCTTTTCACCACCGCAGCACAGAGCAAGCCGCAGGATCTACTCCGATCCTCCTGCGTCCACGCACGCTACCCGCGTCTGTGCCTGCGCACCCTCTCGCACTACCCGGGGCCCGCCAACACGCCCCTCGACATGGCCCGAGCCGCGCTCAGGGTCAGCCTGGCCCACACCCGCCGGACCTCCAAGTTCCTGCACACGCTGTCCAAAGGCGGCGCCGCCGCCATGAGCAAGCGGCAGCGCTCCGCGCTGCGAGACTGCACTGAGCAGATCTCGGACTCCGTGGACCAGCTCCGGCGGAGCCTCGACGAGTTACAACACCTACGCGCCGAGACCTTCCGCTGGCAAATGAGCAACGCACAGACGTGGGTGAGCGCTGCCCTCACCGACGGCGACACTTGCCTCGACGGCTTCGCCGGCAATGCCAGGCCCGACGTCAAACGCAGGGTGAACGACGTTGCCAGGGTCACCAGCAATGCTCTGTATATGATTAATCGACTCGGTCAAAGTAGGACCGGAAAGCCCAAGTCCAAGCCCAGACCCAGACCAAGCCCAGGCCTGATCGTCTCAAAGAATTGA 633 0.6209 MHLQISLSMLLLSVFLTSPTLFTTAAQSKPQDLLRSSCVHARYPRLCLRTLSHYPGPANTPLDMARAALRVSLAHTRRTSKFLHTLSKGGAAAMSKRQRSALRDCTEQISDSVDQLRRSLDELQHLRAETFRWQMSNAQTWVSAALTDGDTCLDGFAGNARPDVKRRVNDVARVTSNALYMINRLGQSRTGKPKSKPRPRPSPGLIVSKN 210
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun9g00520 210 FunFam Pectinesterase inhibitor 3 29 186 - -
Viun9g00520 210 PANTHER PECTINESTERASE INHIBITOR-LIKE 9 180 - -
Viun9g00520 210 CDD PMEI-like_3 36 185 - -
Viun9g00520 210 Coils Coil 106 126 - -
Viun9g00520 210 MobiDBLite consensus disorder prediction 185 210 - -
Viun9g00520 210 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 31 185 IPR035513 -
Viun9g00520 210 SMART PMEI_2 29 181 IPR006501 GO:0004857
Viun9g00520 210 NCBIfam pectinesterase inhibitor domain 6 185 IPR006501 GO:0004857
Viun9g00520 210 Gene3D Invertase/pectin methylesterase inhibitor family protein 29 186 IPR035513 -
Viun9g00520 210 Pfam Plant invertase/pectin methylesterase inhibitor 33 180 IPR006501 GO:0004857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun9g00520 Viun-Chr9 3811508 3812516 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun9g00520 29 193 Carbohydrate Esterase AT5G53370 30.814 3.94e-17 77.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun9g00520 - - gmx:100816686 333.954