Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun9g00506 ATGTCGAGCTCGTCGGAGTACTCTGAATTTTCCGGCCAGAAATCGGCCAAGTCGCCGGAGAAGTCGAGCTTCTCTCAGACTTGCAGTCTGCTGAGTCAATACATCAAGGAGAAGGGTAGCTTTGGAGATCTCACCCTCGGCATGACATGCAACGCCGAACCATGTGGGTCACCTGAGACTTCTTGTCACTCTGCTACAACAATGAACTTGTTTCCTACCAATGAAAACAACGTTACACCAAAGAACCTGACAGCCATGGATTTGCTCTCTCCACAAGCTTCCTATCGTCCTTCAGAGGAGATTCCAACCTTGGTTAATTCCAGTGCACTGAAGTCTGCGAACAAGGTTGCTAAAACTGCACAGATGACAATCTTTTATGGAGGACAAGTTGTTGTGTTTGATGATTTTCCTGCTGACAAAGCCAATGAGATCATGTCCTATGCTAGAGGGAAGCCACAGAGTCAGAACAATTCTGTTTTCACTTACACACAGAGCCAGCCTTCATTTCCTCCTAGTTTGGTCAGAACTTCTGCGGATTCAACTGCTCCAATTATTCCTACTGTCACTATTACCAACACCATCCATGAACACTCTCAACCATCATCCAGGCCTGTTGTTTGTGATCCACCAATTGCTAGAAAAGCTTCACTCCACCGGTTTCTGTTGAAGAGAAAGGATAGAATTGCTTCCAAAGCTCCATATCAAGTACCAAACGGGCCATCAACTGAGTCCATGCCACCATGGCTTGGGTTGAATGCTACTTCACCTAAAATCTGA 777 0.4595 MSSSSEYSEFSGQKSAKSPEKSSFSQTCSLLSQYIKEKGSFGDLTLGMTCNAEPCGSPETSCHSATTMNLFPTNENNVTPKNLTAMDLLSPQASYRPSEEIPTLVNSSALKSANKVAKTAQMTIFYGGQVVVFDDFPADKANEIMSYARGKPQSQNNSVFTYTQSQPSFPPSLVRTSADSTAPIIPTVTITNTIHEHSQPSSRPVVCDPPIARKASLHRFLLKRKDRIASKAPYQVPNGPSTESMPPWLGLNATSPKI 258
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun9g00506 258 ProSiteProfiles Tify domain profile. 115 150 IPR010399 -
Viun9g00506 258 PANTHER PROTEIN TIFY 4A-RELATED-RELATED 13 242 IPR040390 -
Viun9g00506 258 MobiDBLite consensus disorder prediction 1 21 - -
Viun9g00506 258 MobiDBLite consensus disorder prediction 235 258 - -
Viun9g00506 258 Pfam Jas motif 210 235 IPR018467 -
Viun9g00506 258 MobiDBLite consensus disorder prediction 231 258 - -
Viun9g00506 258 SMART tify_2 115 150 IPR010399 -
Viun9g00506 258 Pfam tify domain 118 148 IPR010399 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun9g00506 Viun-Chr9 3619292 3621700 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun9g00506 1 253 Tify Gene Family AT1G19180 39.636 6.67e-45 150
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Tify Viun9g00506 tify 6.3e-18 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun9g00506 K13464 - gmx:100801449 395.586