Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Viun9g00472 | ATGATGAATGGGAGGAACAGGTTTCCCTTCACCCCATCACAGTGGCAAGAGCTTGAACATCAAGCTCTAATCTACAAGTACATGGCTTCAGGGATTTCGATTCCACCTGATCTTCTCTTCACCATAAAAAGGAGCTACTTTGATTCCCCTCTCTCCTCAAGGCTTTTGCCTAACCAGCCACAGCACTTTGGATGGAACTATCTGCAGATGGGTTTGGGGAGAAAAATAGACCCTGAGCCTGGGAGGTGTAGAAGAACTGATGGCAAAAAATGGAGGTGCTCCAAAGAGGCATACCCAGATTCTAAGTACTGTGAGAGGCACATGCACAGAGGGAAAAATCGTTCAAGAAAGCCTGTGGAAGTTTTGAAAACAACACCGTCATCATCAAACACAAATGCTTCAACTCACCAACACCAACACCACCAGCAACAACAGCAACAACCAATCTCATCAATCACCAAACTCAATACTACTCTTTCTCCTCTTGCATCATCATCGTCTGAATCACACTATGCTCCCTTTCTCTATCAACACCCTCCATCGTCAAGGTCCTCTGCCATTGGCTTGTCCTTTGAAGACAACAGTGCTCCCTTGTTTCTTGACACTGGCTCTTGCTCTCAGTCCAACACAGATTGCAGGAGTAGGTATGCATACGGAGAGAAAGAAGAGGTGGATGAACACGCTTTCTTCACAGAGCCGTGTGGTATCATGAAAAGCTTTTCTGGTTCCTCCATGGATGATTCTTGGCAACTCACGCCATTGACTATGAGCTCCTCCTCTTCTTCCACCAAACAGAGGAGTTCCTTTGGCCTGTCCAATGATTATTCTTGCCTGCAACTCCAGAGCCACTCAAAGCCTCAGGAGCAACAAGATCAGGGTGGTTGCTACATGCTGGGTGGAGGAGGCCAACTTGGAAAAGAAGAACCTCAGAAAACCGTTCATCGCTTCTTCGATGAATGGCCCCACAAAGGAAGACAAGGATCTTGGCTTGATTTGGATGACAAATCTTCCACAACCCAGCTTTCAATTTCCATCCCCACCTCTTCTCATGATTTCCCAGCCTTCAGTTCCAGAACCCATCATGATGGTTGA | 1092 | 0.467 | MMNGRNRFPFTPSQWQELEHQALIYKYMASGISIPPDLLFTIKRSYFDSPLSSRLLPNQPQHFGWNYLQMGLGRKIDPEPGRCRRTDGKKWRCSKEAYPDSKYCERHMHRGKNRSRKPVEVLKTTPSSSNTNASTHQHQHHQQQQQQPISSITKLNTTLSPLASSSSESHYAPFLYQHPPSSRSSAIGLSFEDNSAPLFLDTGSCSQSNTDCRSRYAYGEKEEVDEHAFFTEPCGIMKSFSGSSMDDSWQLTPLTMSSSSSSTKQRSSFGLSNDYSCLQLQSHSKPQEQQDQGGCYMLGGGGQLGKEEPQKTVHRFFDEWPHKGRQGSWLDLDDKSSTTQLSISIPTSSHDFPAFSSRTHHDG | 363 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Viun9g00472 | 363 | ProSiteProfiles | QLQ domain profile. | 9 | 44 | IPR014978 | GO:0005524|GO:0005634|GO:0006355 | |
Viun9g00472 | 363 | MobiDBLite | consensus disorder prediction | 104 | 148 | - | - | |
Viun9g00472 | 363 | Pfam | QLQ | 9 | 42 | IPR014978 | GO:0005524|GO:0005634|GO:0006355 | |
Viun9g00472 | 363 | ProSiteProfiles | WRC domain profile. | 77 | 121 | IPR014977 | - | |
Viun9g00472 | 363 | MobiDBLite | consensus disorder prediction | 341 | 363 | - | - | |
Viun9g00472 | 363 | SMART | QLQ_2 | 8 | 44 | IPR014978 | GO:0005524|GO:0005634|GO:0006355 | |
Viun9g00472 | 363 | MobiDBLite | consensus disorder prediction | 120 | 148 | - | - | |
Viun9g00472 | 363 | Pfam | WRC | 78 | 120 | IPR014977 | - | |
Viun9g00472 | 363 | MobiDBLite | consensus disorder prediction | 282 | 304 | - | - | |
Viun9g00472 | 363 | PANTHER | GROWTH-REGULATING FACTOR 5 | 8 | 351 | IPR031137 | GO:0005634|GO:0006351|GO:0032502 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Viun9g00472 | Viun-Chr9 | 3339875 | 3342213 | Dispersed/Tandem |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Viun9g00472 | 7 | 120 | GRF Transcription Factor Family | AT3G13960 | 71.053 | 1.59e-54 | 182 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | GRF | Viun9g00472 | WRC | 7.6e-21 | No_clan |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Viun9g00472 | - | - | vun:114162468 | 693.345 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Viun9g00472 | 9 | 3339875 | 3342213 | Viun9g00472 | 9 | 3339875 | 3342213 | ECH | |
Viun3g05428 | 3 | 60311503 | 60314402 | Viun9g00472 | 9 | 3339875 | 3342213 | PCT |