Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun9g00471 ATGATGAATGGGAGGAACAGGTTTCCCTTCACCCCATCACAGTGGCAAGAGCTTGAACATCAAGCTCTAATCTACAAGTACATGGCTTCAGGGATTTCGATTCCACCTGATCTTCTCTTCACCATAAAAAGGAGCTACTTTGATTCCCCTCTCTCCTCAAGGCTTTTGCCTAACCAGCCACAGCACTTTGGATGGAACTATCTGCAGATGGGTTTGGGGAGAAAAATAGACCCTGAGCCTGGGAGGTGTAGAAGAACTGATGGCAAAAAATGGAGGTGCTCCAAAGAGGCATACCCAGATTCTAAGTACTGTGAGAGGCACATGCACAGAGGGAAAAATCGTTCAAGAAAGCCTGTGGAAGTTTTGAAAACAACACCGTCATCATCAAACACAAATGCTTCAACTCACCAACACCAACACCACCAGCAACAACAGCAACAACCAATCTCATCAATCACCAAACTCAATACTACTCTTTCTCCTCTTGCATCATCATCGTCTGAATCACACTATGCTCCCTTTCTCTATCAACACCCTCCATCGTCAAGGTCCTCTGCCATTGGCTTGTCCTTTGAAGACAACAGTGCTCCCTTGTTTCTTGACACTGGCTCTTGCTCTCAGTCCAACACAGATTGCAGGAGTAGGTATGCATACGGAGAGAAAGAAGAGGTGGATGAACACGCTTTCTTCACAGAGCCGTGTGGTATCATGAAAAGCTTTTCTGGTTCCTCCATGGATGATTCTTGGCAACTCACGCCATTGACTATGAGCTCCTCCTCTTCTTCCACCAAACAGAGGAGTTCCTTTGGCCTGTCCAATGATTATTCTTGCCTGCAACTCCAGAGCCACTCAAAGCCTCAGGAGCAACAAGATCAGGGTGGTTGCTACATGCTGGGTGGAGGAGGCCAACTTGGAAAAGAAGAACCTCAGAAAACCGTTCATCGCTTCTTCGATGAATGGCCCCACAAAGGAAGACAAGGATCTTGGCTTGATTTGGATGACAAATCTTCCACAACCCAGCTTTCAATTTCCATCCCCACCTCTTCTCATGATTTCCCAGCCTTCAGTTCCAGAACCCATCATGTGGTGAAGAAGAGTGAGAAGGTTTTTGTAAGATGGTTGAGCTTACATTTGAATAATGGGTCCTTGTACGGAATGAAAGGCCAAAAATGTACGGAGAAGGTGGGGTTAAGATGCTTCGGGGTCTTCTTTCAACCACACCACCCTCTTTTTTTTCTTCTGCCATAA 1248 0.4615 MMNGRNRFPFTPSQWQELEHQALIYKYMASGISIPPDLLFTIKRSYFDSPLSSRLLPNQPQHFGWNYLQMGLGRKIDPEPGRCRRTDGKKWRCSKEAYPDSKYCERHMHRGKNRSRKPVEVLKTTPSSSNTNASTHQHQHHQQQQQQPISSITKLNTTLSPLASSSSESHYAPFLYQHPPSSRSSAIGLSFEDNSAPLFLDTGSCSQSNTDCRSRYAYGEKEEVDEHAFFTEPCGIMKSFSGSSMDDSWQLTPLTMSSSSSSTKQRSSFGLSNDYSCLQLQSHSKPQEQQDQGGCYMLGGGGQLGKEEPQKTVHRFFDEWPHKGRQGSWLDLDDKSSTTQLSISIPTSSHDFPAFSSRTHHVVKKSEKVFVRWLSLHLNNGSLYGMKGQKCTEKVGLRCFGVFFQPHHPLFFLLP 415
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun9g00471 415 ProSiteProfiles QLQ domain profile. 9 44 IPR014978 GO:0005524|GO:0005634|GO:0006355
Viun9g00471 415 PANTHER GROWTH-REGULATING FACTOR 5 8 351 IPR031137 GO:0005634|GO:0006351|GO:0032502
Viun9g00471 415 MobiDBLite consensus disorder prediction 104 148 - -
Viun9g00471 415 ProSiteProfiles WRC domain profile. 77 121 IPR014977 -
Viun9g00471 415 SMART QLQ_2 8 44 IPR014978 GO:0005524|GO:0005634|GO:0006355
Viun9g00471 415 MobiDBLite consensus disorder prediction 281 302 - -
Viun9g00471 415 Pfam QLQ 9 42 IPR014978 GO:0005524|GO:0005634|GO:0006355
Viun9g00471 415 MobiDBLite consensus disorder prediction 120 148 - -
Viun9g00471 415 Pfam WRC 78 120 IPR014977 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun9g00471 Viun-Chr9 3339875 3342225 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun9g00471 7 120 GRF Transcription Factor Family AT3G13960 71.053 1.23e-53 181
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRF Viun9g00471 WRC 9.1e-21 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun9g00471 - - vun:114162468 777.704