Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun9g00470 ATGATGAATGGGAGGAACAGGTTTCCCTTCACCCCATCACAGTGGCAAGAGCTTGAACATCAAGCTCTAATCTACAAGTACATGGCTTCAGGGATTTCGATTCCACCTGATCTTCTCTTCACCATAAAAAGGAGCTACTTTGATTCCCCTCTCTCCTCAAGGCTTTTGCCTAACCAGCCACAGCACTTTGGATGGAACTATCTGCAGATGGGTTTGGGGAGAAAAATAGACCCTGAGCCTGGGAGGTGTAGAAGAACTGATGGCAAAAAATGGAGGTGCTCCAAAGAGGCATACCCAGATTCTAAGTACTGTGAGAGGCACATGCACAGAGGGAAAAATCGTTCAAGAAAGCCTGTGGAAGTTTTGAAAACAACACCGTCATCATCAAACACAAATGCTTCAACTCACCAACACCAACACCACCAGCAACAACAGCAACAACCAATCTCATCAATCACCAAACTCAATACTACTCTTTCTCCTCTTGCATCATCATCGTCTGAATCACACTATGCTCCCTTTCTCTATCAACACCCTCCATCGTCAAGGTCCTCTGCCATTGGCTTGTCCTTTGAAGACAACAGTGCTCCCTTGTTTCTTGACACTGGCTCTTGCTCTCAGTCCAACACAGATTGCAGGTATGCATACGGAGAGAAAGAAGAGGTGGATGAACACGCTTTCTTCACAGAGCCGTGTGGTATCATGAAAAGCTTTTCTGGTTCCTCCATGGATGATTCTTGGCAACTCACGCCATTGACTATGAGCTCCTCCTCTTCTTCCACCAAACAGAGGAGTTCCTTTGGCCTGTCCAATGATTATTCTTGCCTGCAACTCCAGAGCCACTCAAAGCCTCAGGAGCAACAAGATCAGGGTGGTTGCTACATGCTGGGTGGAGGAGGCCAACTTGGAAAAGAAGAACCTCAGAAAACCGTTCATCGCTTCTTCGATGAATGGCCCCACAAAGGAAGACAAGGATCTTGGCTTGATTTGGATGACAAATCTTCCACAACCCAGCTTTCAATTTCCATCCCCACCTCTTCTCATGATTTCCCAGCCTTCAGTTCCAGAACCCATCATGTGGTGAAGAAGAGTGAGAAGGTTTTTGTAAGATGGTTGAGCTTACATTTGAATAATGGGTCCTTGTACGGAATGAAAGGCCAAAAATGTACGGAGAAGGTGGGGTTAAGATGCTTCGGGGTCTTCTTTCAACCACACCACCCTCTTTTTTTTCTTCTGCCATAA 1242 0.4614 MMNGRNRFPFTPSQWQELEHQALIYKYMASGISIPPDLLFTIKRSYFDSPLSSRLLPNQPQHFGWNYLQMGLGRKIDPEPGRCRRTDGKKWRCSKEAYPDSKYCERHMHRGKNRSRKPVEVLKTTPSSSNTNASTHQHQHHQQQQQQPISSITKLNTTLSPLASSSSESHYAPFLYQHPPSSRSSAIGLSFEDNSAPLFLDTGSCSQSNTDCRYAYGEKEEVDEHAFFTEPCGIMKSFSGSSMDDSWQLTPLTMSSSSSSTKQRSSFGLSNDYSCLQLQSHSKPQEQQDQGGCYMLGGGGQLGKEEPQKTVHRFFDEWPHKGRQGSWLDLDDKSSTTQLSISIPTSSHDFPAFSSRTHHVVKKSEKVFVRWLSLHLNNGSLYGMKGQKCTEKVGLRCFGVFFQPHHPLFFLLP 413
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun9g00470 413 ProSiteProfiles QLQ domain profile. 9 44 IPR014978 GO:0005524|GO:0005634|GO:0006355
Viun9g00470 413 MobiDBLite consensus disorder prediction 104 148 - -
Viun9g00470 413 ProSiteProfiles WRC domain profile. 77 121 IPR014977 -
Viun9g00470 413 SMART QLQ_2 8 44 IPR014978 GO:0005524|GO:0005634|GO:0006355
Viun9g00470 413 MobiDBLite consensus disorder prediction 279 300 - -
Viun9g00470 413 PANTHER GROWTH-REGULATING FACTOR 5 8 349 IPR031137 GO:0005634|GO:0006351|GO:0032502
Viun9g00470 413 Pfam QLQ 9 42 IPR014978 GO:0005524|GO:0005634|GO:0006355
Viun9g00470 413 MobiDBLite consensus disorder prediction 120 148 - -
Viun9g00470 413 Pfam WRC 78 120 IPR014977 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun9g00470 Viun-Chr9 3339875 3342234 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun9g00470 7 120 GRF Transcription Factor Family AT3G13960 71.053 1.33e-53 181
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRF Viun9g00470 WRC 9e-21 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun9g00470 - - vun:114162468 769.229