Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun9g00468 ATGGAAACCAACAACTGTTGTGAAAAACAAGGAGCATGGTCCTCCGATGAAGACCAAATCCTCTTCAACTATGTTCAACTCACCGGAGAAGGAAATTGGACAGACCTTCCCCAAAGAGCTGGGTTGAAACGATGTGGTGAGAATTGCAAACATCGATGGCTGAACTATCTCAAACCAACCATCCCCAGAGAGAACTTTTCTTGGGATGAACAAGAACTCATCATCAGACTGCATAAACTCTTGGGAAATAGATGGTGTATGATTGCAGGAAGATTACCAGGACGGAGTGAAGATGAGATAAAGAATTACTGGAATACTTATTTGAGCAAGAAGGTAGAAGAAGAGAAGAAGGTTGGGAGCAGAAGTGTGAAAAGTAGAAGTATGTCAAGTGTTGAATCTCCATGGTTCTCTCAAAATGACCTTGCTATGAATTCCATGGACTCTCCAAACCCTGTGATAGTTAGACCTAAAGTTGTTAGGTTAGCCAAGGCTGTGCTGCCAAGACTGGTAGGTAGCTAA 519 0.4258 METNNCCEKQGAWSSDEDQILFNYVQLTGEGNWTDLPQRAGLKRCGENCKHRWLNYLKPTIPRENFSWDEQELIIRLHKLLGNRWCMIAGRLPGRSEDEIKNYWNTYLSKKVEEEKKVGSRSVKSRSMSSVESPWFSQNDLAMNSMDSPNPVIVRPKVVRLAKAVLPRLVGS 172
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun9g00468 172 Gene3D - 10 62 - -
Viun9g00468 172 CDD SANT 65 108 IPR001005 -
Viun9g00468 172 Pfam Myb-like DNA-binding domain 11 57 IPR001005 -
Viun9g00468 172 Pfam Myb-like DNA-binding domain 63 108 IPR001005 -
Viun9g00468 172 SMART sant 62 110 IPR001005 -
Viun9g00468 172 SMART sant 9 59 IPR001005 -
Viun9g00468 172 CDD SANT 12 57 IPR001005 -
Viun9g00468 172 PANTHER TRANSCRIPTION FACTOR MYB8-RELATED-RELATED 1 124 - -
Viun9g00468 172 ProSiteProfiles Myb-like domain profile. 9 57 IPR001005 -
Viun9g00468 172 Gene3D - 65 133 - -
Viun9g00468 172 SUPERFAMILY Homeodomain-like 10 104 IPR009057 -
Viun9g00468 172 ProSiteProfiles Myb-like domain profile. 58 108 IPR001005 -
Viun9g00468 172 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 57 IPR017930 -
Viun9g00468 172 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 58 112 IPR017930 -
Viun9g00468 172 FunFam MYB-related transcription factor 9 62 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun9g00468 Viun-Chr9 3299963 3302659 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun9g00468 9 134 MYB Transcription Factor Family AT5G40330 50.794 9.57e-46 147
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Viun9g00468 Myb_DNA-binding 7.2e-13 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun9g00468 K09422 - gmx:778159 217.238