Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun9g00460 ATGGAAGAAGAAAGAAGCGTGGCAGACAAGAAAGTGACAAAGAACGAGGTTGTTCTACGAATTTCAGACTCTGAAGGAGCCACGAATGCAATGACCGAAATAAAAGATTCTGAAAGTTTTTCAGTAGCTGAAAGCAGTTCCCTTTCTCCTCATCACAACACCCAGATGAGAAACCACGATGAAGTTTCCACAGAGTTGATGACAACTACAAAGAGGTTGATCGGTCAGTCGGAATTTTCGAAGCCAAAGTCCAGAATGATGGATCCACCGTGTCCAAGATATGCAAAAACTGTTGAAGAAAAGGCTCGAATGACAAGTTCATTTACCAGGATTTCTCGTAACAGGAACGTTCCCGAAGCAACTATAGTGACCCCAAGAACCCCCTTGCTTGGGACTCCTCCCCCTGAAGAAGATGATGACGATGAAGAGATGTACAAGATTGCAAATATTGAAGTGACCAAGAGATCTGGTAGGAAGTGGAGAGTTGTTGAGTTGTTTGCTTTTGCTTTCATCATGGGGTTTTTTATTGCAAGTTTAACTGTTGCTGAGCTGCAAAAAAGAGAGATTTGGGGTTTGAAGCTGTGGAAATGGTGTGTATTTATATTGGTTATCCTCTGTGGTAGATTGGTCACTGAGTGGTTTATCAATGTTTTGGTTTTCTTGATTGAGAGGAACTTTTTGTTTAAGAAGAAGGTTTTGTATTTTGTGTATGGTGTGAAGAAGAGTGTTCAGGGCTTTATATGGCTGAGTTTGGTTCTTGTGACATGGGATATGCTTTTCAGCCCTGGAGTGAAGATAACCAGTAAGGTTGGTAGGATTCTTAATTTCATTGCTCTGACCCTTGCTTCTTGTCTTATTGGAGCAGCTTTGTGGTTGGCCAAAACATTGTTGATAAAGCTTTTAGCTTCAAGTTTTCAATCTACTAGATTCTTTGACAGGGTGCAAGAATCAATCTTTCATCAATACATTCTCAAGACTCTTTCAGGCCCTCCCTTGATGGAGATGGCTGAAAAGGTAGGTACAACTTCAAATACTGACCAACTCAGTTATAAGACCATGGTTAACAAGAAGGAAGGGGAGAAAGGACAAGTAATTGATGTGGACAAGCTCAAGAAAATGAAACAAGAAAAGGTTTCTCCTTTGACTATGAAAGGGTTGATTAATGTGATAAGGAGTTCTGGGTTATCTACCATCTCCTATGCACAGGATGAAGATGAGAATGAACAGAAAGATAATGAAATTAATAGCGAGTGGGAAGCAAAAGCAGCTGCTTATAGAATTTTTAGGAACGTAGCCAAGCCAGGACACAAGTATATTGAGATAGATGACCTCTTGCGATTCATGAAAATTGAAGAAGTGGAAAACTTGCTTCCACTATTTGAAGGTGCAGTTGAGACTAGAAGAATTAAGAGGAAGTCTCTCAAGAACTGGCTGGTGAAAGTCTACCTTGGACGGAGATCACTCATACATTCACTAAATGATACCAACACAGCTGTTGATGACTTGAACATACTTGCTTCTGCAGTTGTGGTTATTGTGACCATTGTTGTGTGGCTTCTTTTAACTGGTGTCTTAACAACTAAAGTTCTTGTCTTTATATCATCTCAGCTTTTACTTGTGGGTTTCATGTTTGGCAACACTGCTAAGACTGTGTTTGAAGCTATTATATTTGTTTTTGTGGTGCACCCTTTTGATGTTGGTGATCGTTGCGTCGTTGATGGTGTTCAGATGGTCGTGGAAGAGATGAACATACTAACCACCGTCTTTCTGAGATATGACAATGAAAAGATTTTCTATCCAAATTCAGTTCTCTCAACCAAGCCAATCAGTAACTTCAACAGGAGTCCAGAAATGAGTGATTCTGTTGAATTTGCTGTTGATGTTTCTACTTCTATTGAAAGTATTGGAGCTTTAAAGGCAAAGTTAAAAGTATATTTGGAGAGTAGGCCTCAGCACTGGCATACCAAACACAACGTATTGGTTAAGGATATTGAGAATGTGAATAAGATGAAAATGGCTGTGTATGTTACTCACACCATCAATTTTCAGAACTATGGGGATAAGAGCTGCAGAAGATCCGAATTAGTGCTGGAGTTAAAGAAAATTCTTGAAGATCTTAATATTAAATATCATCTGCTGCCACAAGAAGTTCATGTCAGTTATGGAAGGTCACAAGACTCAACATCTCAAGCACTGTGA 2199 0.3952 MEEERSVADKKVTKNEVVLRISDSEGATNAMTEIKDSESFSVAESSSLSPHHNTQMRNHDEVSTELMTTTKRLIGQSEFSKPKSRMMDPPCPRYAKTVEEKARMTSSFTRISRNRNVPEATIVTPRTPLLGTPPPEEDDDDEEMYKIANIEVTKRSGRKWRVVELFAFAFIMGFFIASLTVAELQKREIWGLKLWKWCVFILVILCGRLVTEWFINVLVFLIERNFLFKKKVLYFVYGVKKSVQGFIWLSLVLVTWDMLFSPGVKITSKVGRILNFIALTLASCLIGAALWLAKTLLIKLLASSFQSTRFFDRVQESIFHQYILKTLSGPPLMEMAEKVGTTSNTDQLSYKTMVNKKEGEKGQVIDVDKLKKMKQEKVSPLTMKGLINVIRSSGLSTISYAQDEDENEQKDNEINSEWEAKAAAYRIFRNVAKPGHKYIEIDDLLRFMKIEEVENLLPLFEGAVETRRIKRKSLKNWLVKVYLGRRSLIHSLNDTNTAVDDLNILASAVVVIVTIVVWLLLTGVLTTKVLVFISSQLLLVGFMFGNTAKTVFEAIIFVFVVHPFDVGDRCVVDGVQMVVEEMNILTTVFLRYDNEKIFYPNSVLSTKPISNFNRSPEMSDSVEFAVDVSTSIESIGALKAKLKVYLESRPQHWHTKHNVLVKDIENVNKMKMAVYVTHTINFQNYGDKSCRRSELVLELKKILEDLNIKYHLLPQEVHVSYGRSQDSTSQAL 732
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun9g00460 732 PIRSF Memb_At2g17000 2 731 IPR016688 -
Viun9g00460 732 MobiDBLite consensus disorder prediction 29 59 - -
Viun9g00460 732 PANTHER MECHANOSENSITIVE ION CHANNEL PROTEIN 5 9 721 IPR016688 -
Viun9g00460 732 SUPERFAMILY Sm-like ribonucleoproteins 553 612 IPR010920 -
Viun9g00460 732 Pfam Mechanosensitive ion channel 507 709 IPR006685 GO:0016020|GO:0055085
Viun9g00460 732 Gene3D - 563 612 IPR023408 -
Viun9g00460 732 MobiDBLite consensus disorder prediction 29 53 - -
Viun9g00460 732 FunFam Predicted mechanosensitive ion channel 563 612 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun9g00460 Viun-Chr9 3242794 3245752 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun9g00460 49 720 Mechanosensitive Ion Channel Family AT5G12080 50.803 0.0 684
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun9g00460 K22048 - gmx:100777332 1032.71