Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun9g00446 ATGAAGAAAGGGAGCTTAAGCTCTGGTCTCAAACTCACTGTTCCTGCATCTGATTGGGGTTCATTTTCCACCAAGTTTTTGTCTGAGTCTGAAAGTGAAACGTTCAAGGCAGTGGACTTGCTTGTCGACAAGGAAGGAGTTCGAGTTGTTTCTGAGAAGGAAGAGGAAGCTCCACCACCAATCACGCCACTAGACAACCAGTTGAATCTGGCAGATATTGATACAATCAAAGTGATTGGAAAAGGAAATGGAGGGATAGTGCAATTGGTGCAACACAAATGGACTAATCAATTTTTTGCATTGAAGCCTACAGAAATCTGCCCCATAGAAGTTTGGGTCAAAGTGTGGGAAATTCATATGAATATTGAGGAGCCTATTCAAAGGCAGATAGCACTTGAGCTAAAAATTAATCAATCAGCACAATGTCCTTATGTTGTTGTCTGCTACCAGTCATCCTACCATAATGGTGTCATATCAATCATATTTGAGTACATGGACGGAGGATCCTTAGAAGATCTTCTGAACAAAGTTCAAAAAATTCCAGAGTCGTATCTTGCTGCCATCTGCAAGCAGGTGCTGAATGGTTTAATGTATCTTCACCATGAAAAATACATTATCCACAGGGACTTAAAACCTTCTAATCTGCTGATAAATCATAGAGGGGAGGTAAAGATTACTGACTTTGGTGTAAGCATAATCATGGAAAATACATCTGGTCAAGCAAATACTTTCATTGGCACACACAGCTATATGTCTCCAGAGAGAATCACCAGTAACCAGAATGGCTACGACTACAAAAGTGATATATGGAGCCTGGGACTGATTTTGCTCAAGTGTGCCACGGGGCAGTTTCCATATACACCGCCAGATCAACGTGAGGGATGGGAAAATATTTTCCAGCTTATTGAAGTCATTGTTGAAAAACCTTCCCCCACTGCTCCACCAGAAGATTTTTCTCCAGAATTTTGCTCATTTATCTCAGCATGTTTACAGAAAAATCCAAGAGATAGACCGTCTGCTCGTGACCTTATAAACCATCCTTTTATCAAGTTGTATGAGGACTTGAATGTGGATCTTTCAACTTATTTCTACAACGCAGGATCTACACTTGCAACCATATAG 1122 0.4064 MKKGSLSSGLKLTVPASDWGSFSTKFLSESESETFKAVDLLVDKEGVRVVSEKEEEAPPPITPLDNQLNLADIDTIKVIGKGNGGIVQLVQHKWTNQFFALKPTEICPIEVWVKVWEIHMNIEEPIQRQIALELKINQSAQCPYVVVCYQSSYHNGVISIIFEYMDGGSLEDLLNKVQKIPESYLAAICKQVLNGLMYLHHEKYIIHRDLKPSNLLINHRGEVKITDFGVSIIMENTSGQANTFIGTHSYMSPERITSNQNGYDYKSDIWSLGLILLKCATGQFPYTPPDQREGWENIFQLIEVIVEKPSPTAPPEDFSPEFCSFISACLQKNPRDRPSARDLINHPFIKLYEDLNVDLSTYFYNAGSTLATI 373
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun9g00446 373 ProSitePatterns Serine/Threonine protein kinases active-site signature. 205 217 IPR008271 GO:0004672|GO:0006468
Viun9g00446 373 Gene3D Transferase(Phosphotransferase) domain 1 167 369 - -
Viun9g00446 373 SUPERFAMILY Protein kinase-like (PK-like) 71 357 IPR011009 -
Viun9g00446 373 Pfam Protein kinase domain 75 349 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun9g00446 373 FunFam Mitogen-activated protein kinase kinase 6 168 368 - -
Viun9g00446 373 PANTHER MITOGEN-ACTIVATED KINASE KINASE KINASE 24 351 - -
Viun9g00446 373 Gene3D Phosphorylase Kinase; domain 1 49 166 - -
Viun9g00446 373 SMART serkin_6 73 349 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun9g00446 373 CDD PKc_MAPKK_plant_like 71 353 - -
Viun9g00446 373 ProSitePatterns Protein kinases ATP-binding region signature. 79 102 IPR017441 GO:0005524
Viun9g00446 373 ProSiteProfiles Protein kinase domain profile. 73 349 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun9g00446 Viun-Chr9 3143759 3148846 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun9g00446 29 370 MAP Kinase Kinase Gene Family AT4G26070 60.819 1.86e-154 436
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE7 Viun9g00446 Pkinase 4.5e-64 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun9g00446 K20603 - gmx:100789241 595.119