Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun9g00445 ATGAAGAAAGGGAGCTTAAGCTCTGGTCTCAAACTCACTGTTCCTGCATCTGATTGGGGTTCATTTTCCACCAAGTTTTTGTCTGAGTCTGAAAGTGAAACGTTCAAGGCAGTGGACTTGCTTGTCGACAAGGAAGGAGTTCGAGTTGTTTCTGAGAAGGAAGAGGAAGCTCCACCACCAATCACGCCACTAGACAACCAGTTGAATCTGGCAGATATTGATACAATCAAAGTGATTGGAAAAGGAAATGGAGGGATAGTGCAATTGGTGCAACACAAATGGACTAATCAATTTTTTGCATTGAAGCCTACAGAAATCTGCCCCATAGAAGTTTGGGTCAAAGTGTGGGAAATTCATATGAATATTGAGGAGCCTATTCAAAGGCAGATAGCACTTGAGCTAAAAATTAATCAATCAGCACAATGTCCTTATGTTGTTGTCTGCTACCAGTCATCCTACCATAATGGTGTCATATCAATCATATTTGAGTACATGGACGGAGGATCCTTAGAAGATCTTCTGAACAAAGTTCAAAAAATTCCAGAGTCGTATCTTGCTGCCATCTGCAAGCAGGTGCTGAATGGTTTAATGTATCTTCACCATGAAAAATACATTATCCACAGGGACTTAAAACCTTCTAATCTGCTGATAAATCATAGAGGGGAGCCAGAGAGAATCACCAGTAACCAGAATGGCTACGACTACAAAAGTGATATATGGAGCCTGGGACTGATTTTGCTCAAGTGTGCCACGGGGCAGTTTCCATATACACCGCCAGATCAACGTGAGGGATGGGAAAATATTTTCCAGCTTATTGAAGTCATTGTTGAAAAACCTTCCCCCACTGCTCCACCAGAAGATTTTTCTCCAGAATTTTGCTCATTTATCTCAGCATGTTTACAGAAAAATCCAAGAGATAGACCGTCTGCTCGTGACCTTATAAACCATCCTTTTATCAAGTTGTATGAGGACTTGAATGTGGATCTTTCAACTTATTTCTACAACGCAGGATCTACACTTGCAACCATATAG 1032 0.4109 MKKGSLSSGLKLTVPASDWGSFSTKFLSESESETFKAVDLLVDKEGVRVVSEKEEEAPPPITPLDNQLNLADIDTIKVIGKGNGGIVQLVQHKWTNQFFALKPTEICPIEVWVKVWEIHMNIEEPIQRQIALELKINQSAQCPYVVVCYQSSYHNGVISIIFEYMDGGSLEDLLNKVQKIPESYLAAICKQVLNGLMYLHHEKYIIHRDLKPSNLLINHRGEPERITSNQNGYDYKSDIWSLGLILLKCATGQFPYTPPDQREGWENIFQLIEVIVEKPSPTAPPEDFSPEFCSFISACLQKNPRDRPSARDLINHPFIKLYEDLNVDLSTYFYNAGSTLATI 343
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun9g00445 343 ProSitePatterns Serine/Threonine protein kinases active-site signature. 205 217 IPR008271 GO:0004672|GO:0006468
Viun9g00445 343 Gene3D Phosphorylase Kinase; domain 1 48 163 - -
Viun9g00445 343 Gene3D Transferase(Phosphotransferase) domain 1 164 226 - -
Viun9g00445 343 PANTHER MITOGEN-ACTIVATED KINASE KINASE KINASE 24 222 - -
Viun9g00445 343 CDD PKc_MAPKK_plant_like 71 323 - -
Viun9g00445 343 SUPERFAMILY Protein kinase-like (PK-like) 72 321 IPR011009 -
Viun9g00445 343 Gene3D Transferase(Phosphotransferase) domain 1 227 339 - -
Viun9g00445 343 ProSitePatterns Protein kinases ATP-binding region signature. 79 102 IPR017441 GO:0005524
Viun9g00445 343 Pfam Protein kinase domain 223 319 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun9g00445 343 Pfam Protein kinase domain 75 222 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun9g00445 343 SMART serkin_6 73 319 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun9g00445 343 ProSiteProfiles Protein kinase domain profile. 73 319 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun9g00445 Viun-Chr9 3143759 3148851 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun9g00445 29 340 MAP Kinase Kinase Gene Family AT4G26070 54.971 1.56e-132 380
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE7 Viun9g00445 Pkinase 3.9e-27 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun9g00445 K20603 - gmx:100789241 523.472