Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun9g00444 ATGGAGGAAATAACTTCGACGGTTGCAGTGCCATTCGCACTTGGGAATTTAATACAAAAAGATCCATCAGTCACAACCCACATGGAGATAACTGGCCTAAAGCTCAGGGCAAACACTGCACCAGTATTAATATTAAATCCTGCAATTGAAAGTGAAAATCACTCAGATATTTGTCTTCAATCCCAAATTAAAGTGTCTTCAGAAGCAAAGAACAACCAGGTTGGAGCTGACCTTGTCTCAGAAATGGTAAGTCAAGGAGACAATAATTGTTTCCATGCTGAAAACCAAACCCAAAATCAATCATTGTTAGCTAAGGATTTTAAGTGTGAGCCTATCTCTCAATCTGCTGCTGGTGACAAAAGTAGTCCTTGTAGGGAGGAATCTTCTGTTTCTGTGGCTAATTGTTGTGAAATAAGTTCACCTATCACCATAAAGGTTGATGATAACACAGTTCATGGAAGGGCTGGTTTGACTGAGCCGCCAGGTTCAGCTATAGAGCCGCTGCAGAACATGGTTTCTGTTGCTGGGGGGCATGAGAGTGAAGATGGAAGTGGATCAGATGAACCTGATAAAAAAACATTTTCTGTGGTTCATGAGATTGCAGAGAAGGCTACATGCTTGGACTTGAGTGGTGCTATCAGCACTAACCCACTATGGGGTTGCTCATCAGTTTGTGGAAGGAGAGAGGAGATGGAAGATGCTATTGCTGTTAGGCCTCATCTTTTTGAAGTTCCTTCAATGATGGTAATGGATGATTATGTGAGTGAAAATTCAAACTTTTCACCAGCCCACTTTTTTGGTGTGTATGATGGACATGGGGGCTGTCAGGTTGCCAATTACTGCCGGGAACATCTTCATTCAGTGTTGGTTGATGAGATAAAAGCTGCACGATGGAGTTTGGATGAACAGAATGGGAGAGAAAACTGGGAGAACCAATGGAAGAAGGCATTCTCCAATTGCTTTCACAAAGTAGATGATGAGGTTGGAGGGGTTGGTGAAGGTAATGGAGCAAGTGTTGAACCTCTTGCTTCTGAGGCTGTTGGCTCCACTGCTGTGGTTGCCCTTTTGACTCAGACTCACATAATAGTTGCAAACTGTGGAGATTCAAGAGCTGTCTTGTGTCGTGGAAAAGAAGCAATGCCACTCTCTGATGATCACAAACCAAATAGAGAAGATGAATGGGAAAGGATAGAAGCTTCAGGAGGAAGGGTCATTCAATGGAATGGGTACCGAGTTCTTGGTGTTTTGGCAGTATCAAGATCCATAGGTGACAGGTACTTGAAACCATGGGTAATTCCAGAGCCAGAAGTGAAGTGTATCCAAAGAGACAAAAACGATGAGTGCCTCATTCTGGCGAGTGATGGATTATGGGATGTGATGACAAATGAAGAAGCCTGTGACTTTGCAAGAAGGAGAATCCTTCTTTGGCATAAGAAGAATGGCAACAACTCATCATCACAACAAGGCCAAGGACCTGACCCTGCAGCTCAGTATGCTGCAGAGTATCTATCTAGACTTGCCCTTCAAAGAGGAACCAAAGATAACATCTCTGTCATTGTTATAGACTTGAAGCCCCAAAGAAAACTCAAGAAAAAAGAATAA 1602 0.4295 MEEITSTVAVPFALGNLIQKDPSVTTHMEITGLKLRANTAPVLILNPAIESENHSDICLQSQIKVSSEAKNNQVGADLVSEMVSQGDNNCFHAENQTQNQSLLAKDFKCEPISQSAAGDKSSPCREESSVSVANCCEISSPITIKVDDNTVHGRAGLTEPPGSAIEPLQNMVSVAGGHESEDGSGSDEPDKKTFSVVHEIAEKATCLDLSGAISTNPLWGCSSVCGRREEMEDAIAVRPHLFEVPSMMVMDDYVSENSNFSPAHFFGVYDGHGGCQVANYCREHLHSVLVDEIKAARWSLDEQNGRENWENQWKKAFSNCFHKVDDEVGGVGEGNGASVEPLASEAVGSTAVVALLTQTHIIVANCGDSRAVLCRGKEAMPLSDDHKPNREDEWERIEASGGRVIQWNGYRVLGVLAVSRSIGDRYLKPWVIPEPEVKCIQRDKNDECLILASDGLWDVMTNEEACDFARRRILLWHKKNGNNSSSQQGQGPDPAAQYAAEYLSRLALQRGTKDNISVIVIDLKPQRKLKKKE 533
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun9g00444 533 PANTHER PROTEIN PHOSPHATASE 171 523 IPR015655 GO:0004722|GO:0006470
Viun9g00444 533 SMART PP2C_4 207 521 IPR001932 -
Viun9g00444 533 Pfam Protein phosphatase 2C 223 516 IPR001932 -
Viun9g00444 533 SUPERFAMILY PP2C-like 216 525 IPR036457 -
Viun9g00444 533 ProSiteProfiles PPM-type phosphatase domain profile. 218 523 IPR001932 -
Viun9g00444 533 FunFam Protein phosphatase 2C 16 210 533 - -
Viun9g00444 533 ProSitePatterns PPM-type phosphatase domain signature. 265 273 IPR000222 GO:0043169
Viun9g00444 533 CDD PP2Cc 220 523 IPR001932 -
Viun9g00444 533 Gene3D - 211 533 IPR036457 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun9g00444 Viun-Chr9 3140350 3143827 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun9g00444 217 532 PP2C-type Phosphatase Gene Family AT1G17550 59.259 1.78e-136 403
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun9g00444 K14497 - gmx:100812974 805.053