Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun9g00430 ATGGAGAATCACAAGATGGTAAAATCGGTGTGTGTTAAGGAGGAGATAGAGAATAACCTGGAGGAGCAGGAAGAGGAAGATGTAGCAGATGTGGGTTCCAGCATGACCTTGGAAAGGGTCGCTGCAGCTAAGAAATTCATCGAGGACCATTACAGGTCTCAGATGAAACTCATCCAACAACGCAAAGAGAGGCGTTTAGAGCTAGAACAGAAGTTAGCATCTGCTCATGTAACAGAAGAGGAACAGATGAATCAATTGAAGGATTTAGAGAGCAAGGAAACTGAGTTTATGCGGTTAAAAAGACACAAAATATGTGTTGATGATTTTGATCTTCTAACCATTATTGGGAGGGGAGCCTTTGGGGAGGTAACACTCTGTCGGGAAAAAACATCAGGTAATATATATGCCATGAAAAAGTTGAAAAAATCTGAAATGCTCAGCAGGGGACAGGTTGAGCATGTTAGAGCTGAAAGGAATGTACTTGCAGAAGTTGCCAGTGACTGCATTGTGAAACTCTTTTACTCTTTTCAAGATGATGAACACTTATATCTCATAATGGAATATTTGCCCGGTGGTGATATAATGACCCTGTTGATGAGAGAAGAAACTTTGACTGAAACTGTGGCTAGATTTTACATTGCCCAAAGTGTTTTGGCCATAGAATCTATTCATAAACACAACTACATTCATAGAGATATAAAACCTGACAACCTTCTATTGGACAAATACGGTCACATGAAGCTATCTGATTTTGGTCTATGCAAGCCACTTGACTGCTCAAGTCTATCATCTATTCATGAAATGCAGATCCTCGATGATGGCAACTTATATGATACCATGGATGTTGATGGAGCCTTGCCAAATGGCAGAAATGGTAGGCGCTGGAAAAGTCCCTTAGAACAACTTCAACACTGGCAAATTAATAGGAGGAAGCTGGCATTTTCCACTGTTGGAACTCCAGATTATATTGCCCCTGAAGTATTACTGAAAAAGGGTTACAGTGTGGAGTGTGACTGGTGGTCTCTTGGTGCTATAATGTATGAAATGCTAGTTGGATATCCCCCATTTTACTCTGATGATCCTGTAACCACATGCCGAAAGATCGTGAACTGGAAAAATCACTTGAAATTTCCAGAGGAGGCCAGATTGACACCTGAAGCCAAGGATCTAATATGCAGGTTGCTCTGTGGTGTTTCACATAGGCTTGGCACTAATGGAGCAGATGAAATTAAAGCTCATCCTTGGTTCAAAGATGTGGCATGGGACAGGCTCTATGAAATGGAGGCAGCATTTAAACCACAGGTCTTTGGAGAGCTTGACACTCAGAATTTTATGAAATTTGATGAAGTTGAACAACCAAAACCAACTAGACCTGGATCTGGACCCATCAGAAAGAAACTCTTAACTTCTCAAGATCTCAGTTTTGTTGGTTATACATATAAGAACTTTGCTGCTGTGAAGGGGATGCGTCAATCTCATGATACAGGTAGCATGTCACCACAGCGGACATCCATTGACTCCACACACAGTGATTCAGCAGTAAACTATTCCATCTGA 1557 0.413 MENHKMVKSVCVKEEIENNLEEQEEEDVADVGSSMTLERVAAAKKFIEDHYRSQMKLIQQRKERRLELEQKLASAHVTEEEQMNQLKDLESKETEFMRLKRHKICVDDFDLLTIIGRGAFGEVTLCREKTSGNIYAMKKLKKSEMLSRGQVEHVRAERNVLAEVASDCIVKLFYSFQDDEHLYLIMEYLPGGDIMTLLMREETLTETVARFYIAQSVLAIESIHKHNYIHRDIKPDNLLLDKYGHMKLSDFGLCKPLDCSSLSSIHEMQILDDGNLYDTMDVDGALPNGRNGRRWKSPLEQLQHWQINRRKLAFSTVGTPDYIAPEVLLKKGYSVECDWWSLGAIMYEMLVGYPPFYSDDPVTTCRKIVNWKNHLKFPEEARLTPEAKDLICRLLCGVSHRLGTNGADEIKAHPWFKDVAWDRLYEMEAAFKPQVFGELDTQNFMKFDEVEQPKPTRPGSGPIRKKLLTSQDLSFVGYTYKNFAAVKGMRQSHDTGSMSPQRTSIDSTHSDSAVNYSI 518
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun9g00430 518 PANTHER SERINE/THREONINE-PROTEIN KINASE 21 470 - -
Viun9g00430 518 MobiDBLite consensus disorder prediction 492 518 - -
Viun9g00430 518 SMART serkin_6 109 416 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun9g00430 518 Gene3D Phosphorylase Kinase; domain 1 72 192 - -
Viun9g00430 518 Pfam Protein kinase domain 111 260 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun9g00430 518 Pfam Protein kinase domain 309 416 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun9g00430 518 CDD STKc_NDR_like 107 481 - -
Viun9g00430 518 MobiDBLite consensus disorder prediction 490 518 - -
Viun9g00430 518 ProSiteProfiles Protein kinase domain profile. 109 416 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun9g00430 518 Coils Coil 6 26 - -
Viun9g00430 518 ProSiteProfiles AGC-kinase C-terminal domain profile. 417 490 IPR000961 GO:0004674|GO:0005524|GO:0006468
Viun9g00430 518 CDD MobB_NDR_LATS-like 43 104 - -
Viun9g00430 518 Gene3D Transferase(Phosphotransferase) domain 1 193 259 - -
Viun9g00430 518 Gene3D Transferase(Phosphotransferase) domain 1 315 436 - -
Viun9g00430 518 FunFam Non-specific serine/threonine protein kinase 193 260 - -
Viun9g00430 518 SUPERFAMILY Protein kinase-like (PK-like) 92 461 IPR011009 -
Viun9g00430 518 FunFam Non-specific serine/threonine protein kinase 70 192 - -
Viun9g00430 518 FunFam Non-specific serine/threonine protein kinase 315 434 - -
Viun9g00430 518 SMART pkinase_C_6 417 482 IPR000961 GO:0004674|GO:0005524|GO:0006468
Viun9g00430 518 ProSitePatterns Serine/Threonine protein kinases active-site signature. 228 240 IPR008271 GO:0004672|GO:0006468
Viun9g00430 518 ProSitePatterns Protein kinases ATP-binding region signature. 115 138 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun9g00430 Viun-Chr9 3102089 3108332 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun9g00430 1 517 AGC Kinase Gene Family AT2G19400 72.989 0.0 767
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_NDR Viun9g00430 Pkinase 1.2e-42 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun9g00430 K08790 - gmx:100811359 892.108