Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun9g00406 ATGGGGGTGATCTTGGCACTGATTCTGCAGCTCTTGAAGCTCTGCGTCATTGGCTTTGTTGTGGCATTCCAAGGATCTCAAGGGTTTGTTATATCCCCATCTCCAAAAACCATACATGTGAATCCTTCCCCCAGTGAAGCACCTGGTTTTATACACCCAAAAGAACCATGGAGAATCATTGCACCAAGCCCTCAAGAAGTACCAAATGGGCCATTTTTTTCCCATCCGGTTACATTTCCACCTCCTAAATCAGCTCCAACTCCAGAGAAAACGAGAGAATCTGAACCATCCATGTCTCCTAGTCCTGCTGCAAGCACCATAACATCATCATATAATGGTGCTCCTGGACCATCAACTGCAGAAGGGAATGTTTCACCATCCATACAATTAAGTCCACCTCAAAGCAAAACACCTGCTTTTAGTCCTCCTGTTTTCACACCAATTTCTCCAGCTCCCATTGCAGTACCTTCAGGGAATTTGACAAAAAATTCACCAGTCAGCCAACCAACTGAACATGGAAGTTTGCCTCCTAAGATTGATGAGAGGAATAAGAGTCACAAGCCTGAGCCAGCTTTTCCAGCTATAGTTCCAATACCTTCTACACAGTTGCCCAAATATTCACCAGTTAGCCAACCAAATGAAAATGGAAGTTTGCCTCATAGAGATGGTGCAAATAATAGTCACATCCCCGAGCCAATTTCACCAGCCCCTTTAGTATTCAGTTTTCCTGAACATCCACCAGTGAGTCAGCCAACTGAACATGGAAGTTTGCCTCCAACTGTTCCCAGAGGGGATATAAACACAGGTCACACATTGGAGCCAGTTTCACACGCCCCAGTTGCACAACCTCCTACAAATTTGCCAAAAAATTCATCTGTTAGTCAACCAACTCATGGAAATTTCCCACCTGATCTTCACAATGGAACTGCAAATAATGATCACACTCACACCCCAGCACAAACGATGTCACCATCAGTTACACCATCAAGTCCATTTCCAGTAGATCCACCATTAGTCCACCCAGTCATACCAGCAGCATCTCCATCCAAATCACCAGCACCTACTGTCTCTCCTGCATTGACTCCTTCCAGAAGCTTTAGTTGGAAAAAAGGTGGAGAACCAGTTTCTGCACCAGTGTACAAAACACCAAAGCCACTACCGGCTATAGTACATTCCCAGACTCAAGCACCTGTTGTCTCTCCAGCATTAACACCTTCTAGAAGCTTCAATTGGAAAAGAGATGGAGAACCAGTTTCTGCTCCTCCATACAAAACACCAAAACCACTACCCGCTATAGTACATTCCACTACTCAAGCTCCTTCTTCTGCACATGTAGCAAGGCAATTTCACTATGCTCCTGAACCATCTCCTAACAAAGATTACCCTCCTGCATCTTCACCTTCAGCCACATTCTATAAGCATCACCACACAAGGAGCACAATCAACAGCCCTGCTCCTGCGTCATCATATTCAGTTTCTCCTTCCACTTTAAAACACCAAGATGAACCAATTCCTCCCTCACGGTTGCCAGCAAGTAGGCATAGACAACATGCTCCATCACCATTGAACACAGTAGGTTCGACAGTTTCCCCGTTTCAGTCACCAGTAAGCCAGATTTCACCAGCTCCTTCTCCATCCTTCAAAATACTTCCCCATTCAACCAAAATTCCAATTCATCCTCCTGAGGTATCTCCTTTAAGACCTTCTTCCAAGAGACCTAAGAAGCCAGTCCCACCTCATATTCAAGCACTACCACCGCCACCTCCCAATGAAGATTGTATATCACTGGTTTGCTCAGATCCTTATACAAGTACTCCACCTGGTGCACCTTGCAAATGTGTGTGGCCCATGAAAGTCAGTCTTCGCCTTAGTGTTTCTTTGTATACTTTCTTCCCTTTGGTTTCAGAGTTTGCTTCTGAAATTGCCATTGGGGTTTTCATGAAGCAAAGTCAAGTTCGCATTATGGGAGCTGATGCAGCAAACCTGCAACCTGATAAAACTATTGTATTCATTGATTTGGTACCACTTGGGGAAAATTTTGATAACACTACAGCCTTTTTAACTTCTGAGAGATTTTGGCATAAACAGGTTGCTATAAAGACTTCTTACTTTGGTGATTATGACGTATTATATGTGAGCTATCCAGGTTTGCCTCCATCTCCTCCTTTACCTCCTTCAAGCATTACAATTGTTGATGGCGGTCCATATTCGGGTGGTGGCAATAACAGTAGGACCATAAAGCCCCTTGGGGTTGACATATCAAAGAGGCAGCATAAAGGTGGAATTAGCAAGGGCATGATTGCTATTATTTCTCTCTCAGGTTTTCTAGTAGTTGTTTTATGCTTTGCTGCTGCTTGGGCCTTGTTCAAGTTCAGAAATCATTCAAGTAAACTGGCATCAACCCCACAAGTTGTGTCTCCTTCACTTACCAAAGCACCAGGTGCTGTCTCAGCAGTTGGAGGCAGGCTTGCTTCAGCTTCAACATCATTCCGGTCTAGCATTGCTGCTTATACAGGATCTGCTAAGACTTTCAGCATGAATGAGATTGAGAAAGCCACAGATAATTTTCATGACTCCAGAGTACTTGGAGAAGGTGGTTTTGGGCGTGTTTATAGTGGCATACTTGAAGATGGGACAAAAGTGGCAGTCAAGGTTCTGAAAAGAGAGGATCATCATGGTGACCGTGAATTCCTATCTGAAGTAGAGATGCTTAGCCGGCTTCACCATAGAAATTTGGTTAAATTGATTGGTATTTGCGCAGAGGTCAGCTTCCGGTGCCTGGTTTATGAACTCATTCCAAATGGCAGTGTGGAATCCCATTTGCATGGGATGGACAAGGAAAACAGCCCCCTTGATTGGAGTGCTCGGATAAAGATAGCACTTGGGGCTGCTCGTGGACTGGCTTATCTGCATGAAGATTCAAGTCCTCATGTCATACATAGAGACTTCAAGTCTAGTAATATCTTGCTGGAAGATGATTTTACTCCAAAAGTATCCGATTTTGGATTAGCCCGAACAGCAGCTGATGAAGAGAACAGACACATATCAACACGAGTAATGGGAACTTTTGGTTATGTGGCTCCGGAGTATGCAATGACAGGCCATCTTCTTGTGAAGAGTGATGTTTACAGCTATGGTGTTGTCCTCCTTGAGCTCTTGACAGGAAGAAAACCAGTAGACATGTCACGACCTCCCGGTCAAGAGAATCTGGTTGCATGGGCTCGTCCATTGCTCTCAAGTGAAGAAGGAGTGGAAGCAATAACAGATCCATCTCTTGGACCTGATGTGGCTTCTGATAGTGTGGCTAAAGTTGCAGCCATTGCTTCTATGTGTGTACAACCAGAGGTTTCAGACCGTCCATTTATGGGTGAGGTTGTTCAGGCTTTAAAACTAGTGTGCAATGAATGTGATGAGGCAAGAGAAACAGGCTCGAGTTCTACCTCTGTTGATTTCAGTCCTTCTAGACAAGTATCAGACAATTTTCAAGGCCAATCTTCAGCCACCAATTATGATTCTGGAGTTGATATTGAAAATGGGCTGTTGGCATCAGAGTTATTCAGCTCAGCATCCGCAAGATATGGAAAGCGAGTGTCAGGATCATTTAGAAGACATTCTTACTCAGGTCCTCTTAGTACCGGAAGAAGCAAACGGTTATGGCAGATAATTAGAAAGCTTTCTGGTGGCAGTGTCAGTGAACATGGAACTATGTTCAAGTTATGA 3720 0.4422 MGVILALILQLLKLCVIGFVVAFQGSQGFVISPSPKTIHVNPSPSEAPGFIHPKEPWRIIAPSPQEVPNGPFFSHPVTFPPPKSAPTPEKTRESEPSMSPSPAASTITSSYNGAPGPSTAEGNVSPSIQLSPPQSKTPAFSPPVFTPISPAPIAVPSGNLTKNSPVSQPTEHGSLPPKIDERNKSHKPEPAFPAIVPIPSTQLPKYSPVSQPNENGSLPHRDGANNSHIPEPISPAPLVFSFPEHPPVSQPTEHGSLPPTVPRGDINTGHTLEPVSHAPVAQPPTNLPKNSSVSQPTHGNFPPDLHNGTANNDHTHTPAQTMSPSVTPSSPFPVDPPLVHPVIPAASPSKSPAPTVSPALTPSRSFSWKKGGEPVSAPVYKTPKPLPAIVHSQTQAPVVSPALTPSRSFNWKRDGEPVSAPPYKTPKPLPAIVHSTTQAPSSAHVARQFHYAPEPSPNKDYPPASSPSATFYKHHHTRSTINSPAPASSYSVSPSTLKHQDEPIPPSRLPASRHRQHAPSPLNTVGSTVSPFQSPVSQISPAPSPSFKILPHSTKIPIHPPEVSPLRPSSKRPKKPVPPHIQALPPPPPNEDCISLVCSDPYTSTPPGAPCKCVWPMKVSLRLSVSLYTFFPLVSEFASEIAIGVFMKQSQVRIMGADAANLQPDKTIVFIDLVPLGENFDNTTAFLTSERFWHKQVAIKTSYFGDYDVLYVSYPGLPPSPPLPPSSITIVDGGPYSGGGNNSRTIKPLGVDISKRQHKGGISKGMIAIISLSGFLVVVLCFAAAWALFKFRNHSSKLASTPQVVSPSLTKAPGAVSAVGGRLASASTSFRSSIAAYTGSAKTFSMNEIEKATDNFHDSRVLGEGGFGRVYSGILEDGTKVAVKVLKREDHHGDREFLSEVEMLSRLHHRNLVKLIGICAEVSFRCLVYELIPNGSVESHLHGMDKENSPLDWSARIKIALGAARGLAYLHEDSSPHVIHRDFKSSNILLEDDFTPKVSDFGLARTAADEENRHISTRVMGTFGYVAPEYAMTGHLLVKSDVYSYGVVLLELLTGRKPVDMSRPPGQENLVAWARPLLSSEEGVEAITDPSLGPDVASDSVAKVAAIASMCVQPEVSDRPFMGEVVQALKLVCNECDEARETGSSSTSVDFSPSRQVSDNFQGQSSATNYDSGVDIENGLLASELFSSASARYGKRVSGSFRRHSYSGPLSTGRSKRLWQIIRKLSGGSVSEHGTMFKL 1239
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun9g00406 1239 MobiDBLite consensus disorder prediction 91 135 - -
Viun9g00406 1239 MobiDBLite consensus disorder prediction 136 150 - -
Viun9g00406 1239 MobiDBLite consensus disorder prediction 283 328 - -
Viun9g00406 1239 CDD STKc_IRAK 862 1130 - -
Viun9g00406 1239 ProSitePatterns Protein kinases ATP-binding region signature. 862 884 IPR017441 GO:0005524
Viun9g00406 1239 ProSiteProfiles Protein kinase domain profile. 856 1132 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun9g00406 1239 MobiDBLite consensus disorder prediction 329 343 - -
Viun9g00406 1239 ProSitePatterns Serine/Threonine protein kinases active-site signature. 978 990 IPR008271 GO:0004672|GO:0006468
Viun9g00406 1239 MobiDBLite consensus disorder prediction 70 373 - -
Viun9g00406 1239 Pfam Protein tyrosine and serine/threonine kinase 859 1129 IPR001245 GO:0004672|GO:0006468
Viun9g00406 1239 MobiDBLite consensus disorder prediction 156 171 - -
Viun9g00406 1239 MobiDBLite consensus disorder prediction 470 500 - -
Viun9g00406 1239 MobiDBLite consensus disorder prediction 1142 1166 - -
Viun9g00406 1239 Gene3D Phosphorylase Kinase; domain 1 828 931 - -
Viun9g00406 1239 MobiDBLite consensus disorder prediction 350 364 - -
Viun9g00406 1239 MobiDBLite consensus disorder prediction 203 222 - -
Viun9g00406 1239 PANTHER OS01G0750732 PROTEIN 585 1154 - -
Viun9g00406 1239 FunFam receptor-like serine/threonine-protein kinase ALE2 829 931 - -
Viun9g00406 1239 MobiDBLite consensus disorder prediction 557 586 - -
Viun9g00406 1239 MobiDBLite consensus disorder prediction 517 537 - -
Viun9g00406 1239 SUPERFAMILY Protein kinase-like (PK-like) 836 1129 IPR011009 -
Viun9g00406 1239 FunFam Receptor-like serine/threonine-protein kinase ALE2 932 1148 - -
Viun9g00406 1239 MobiDBLite consensus disorder prediction 399 537 - -
Viun9g00406 1239 Gene3D Transferase(Phosphotransferase) domain 1 932 1153 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun9g00406 Viun-Chr9 2870468 2880137 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun9g00406 246 1235 Receptor kinase-like Gene Family AT5G56890 53.410 0.0 877
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_Extensin Viun9g00406 PK_Tyr_Ser-Thr 3.3e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun9g00406 - - gmx:100802309 1910.19