Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun9g00405 ATGGGGGTGATCTTGGCACTGATTCTGCAGCTCTTGAAGCTCTGCGTCATTGGCTTTGTTGTGGCATTCCAAGGATCTCAAGGGTCTATTATATCCCCATCTCCAGCATTCCTTCCAGTCATTCATCCTACTGGAGAAGCACCTGCTCCTATCCATCTTGGACTGTCATGGGGAAGCAGTCCACCAAGATCACCTTCAGATGGGTTTGTTATATCCCCATCTCCAAAAACCATACATGTGAATCCTTCCCCCAGTGAAGCACCTGGTTTTATACACCCAAAAGAACCATGGAGAATCATTGCACCAAGCCCTCAAGAAGTACCAAATGGGCCATTTTTTTCCCATCCGGTTACATTTCCACCTCCTAAATCAGCTCCAACTCCAGAGAAAACGAGAGAATCTGAACCATCCATGTCTCCTAGTCCTGCTGCAAGCACCATAACATCATCATATAATGGTGCTCCTGGACCATCAACTGCAGAAGGGAATGTTTCACCATCCATACAATTAAGTCCACCTCAAAGCAAAACACCTGCTTTTAGTCCTCCTGTTTTCACACCAATTTCTCCAGCTCCCATTGCAGTACCTTCAGGGAATTTGACAAAAAATTCACCAGTCAGCCAACCAACTGAACATGGAAGTTTGCCTCCTAAGATTGATGAGAGGAATAAGAGTCACAAGCCTGAGCCAGCTTTTCCAGCTATAGTTCCAATACCTTCTACACAGTTGCCCAAATATTCACCAGTTAGCCAACCAAATGAAAATGGAAGTTTGCCTCATAGAGATGGTGCAAATAATAGTCACATCCCCGAGCCAATTTCACCAGCCCCTTTAGTATTCAGTTTTCCTGAACATCCACCAGTGAGTCAGCCAACTGAACATGGAAGTTTGCCTCCAACTGTTCCCAGAGGGGATATAAACACAGGTCACACATTGGAGCCAGTTTCACACGCCCCAGTTGCACAACCTCCTACAAATTTGCCAAAAAATTCATCTGTTAGTCAACCAACTCATGGAAATTTCCCACCTGATCTTCACAATGGAACTGCAAATAATGATCACACTCACACCCCAGCACAAACGATGTCACCATCAGTTACACCATCAAGTCCATTTCCAGTAGATCCACCATTAGTCCACCCAGTCATACCAGCAGCATCTCCATCCAAATCACCAGCACCTACTGTCTCTCCTGCATTGACTCCTTCCAGAAGCTTTAGTTGGAAAAAAGGTGGAGAACCAGTTTCTGCACCAGTGTACAAAACACCAAAGCCACTACCGGCTATAGTACATTCCCAGACTCAAGCACCTGTTGTCTCTCCAGCATTAACACCTTCTAGAAGCTTCAATTGGAAAAGAGATGGAGAACCAGTTTCTGCTCCTCCATACAAAACACCAAAACCACTACCCGCTATAGTACATTCCACTACTCAAGCTCCTTCTTCTGCACATGTAGCAAGGCAATTTCACTATGCTCCTGAACCATCTCCTAACAAAGATTACCCTCCTGCATCTTCACCTTCAGCCACATTCTATAAGCATCACCACACAAGGAGCACAATCAACAGCCCTGCTCCTGCGTCATCATATTCAGTTTCTCCTTCCACTTTAAAACACCAAGATGAACCAATTCCTCCCTCACGGTTGCCAGCAAGTAGGCATAGACAACATGCTCCATCACCATTGAACACAGTAGGTTCGACAGTTTCCCCGTTTCAGTCACCAGTAAGCCAGATTTCACCAGCTCCTTCTCCATCCTTCAAAATACTTCCCCATTCAACCAAAATTCCAATTCATCCTCCTGAGGTATCTCCTTTAAGACCTTCTTCCAAGAGACCTAAGAAGCCAGTCCCACCTCATATTCAAGCACTACCACCGCCACCTCCCAATGAAGATTGTATATCACTGGTTTGCTCAGATCCTTATACAAGTACTCCACCTGGTGCACCTTGCAAATGTGTGTGGCCCATGAAAGTCAGTCTTCGCCTTAGTGTTTCTTTGTATACTTTCTTCCCTTTGGTTTCAGAGTTTGCTTCTGAAATTGCCATTGGGGTTTTCATGAAGCAAAGTCAAGTTCGCATTATGGGAGCTGATGCAGCAAACCTGCAACCTGATAAAACTATTGTATTCATTGATTTGGTACCACTTGGGGAAAATTTTGATAACACTACAGCCTTTTTAACTTCTGAGAGATTTTGGCATAAACAGGTTGCTATAAAGACTTCTTACTTTGGTGATTATGACGTATTATATGTGAGCTATCCAGGTTTGCCTCCATCTCCTCCTTTACCTCCTTCAAGCATTACAATTGTTGATGGCGGTCCATATTCGGGTGGTGGCAATAACAGTAGGACCATAAAGCCCCTTGGGGTTGACATATCAAAGAGGCAGCATAAAGGTGGAATTAGCAAGGGCATGATTGCTATTATTTCTCTCTCAGGTTTTCTAGTAGTTGTTTTATGCTTTGCTGCTGCTTGGGCCTTGTTCAAGTTCAGAAATCATTCAAGTAAACTGGCATCAACCCCACAAGTTGTGTCTCCTTCACTTACCAAAGCACCAGGTGCTGTCTCAGCAGTTGGAGGCAGGCTTGCTTCAGCTTCAACATCATTCCGGTCTAGCATTGCTGCTTATACAGGATCTGCTAAGACTTTCAGCATGAATGAGATTGAGAAAGCCACAGATAATTTTCATGACTCCAGAGTACTTGGAGAAGGTGGTTTTGGGCGTGTTTATAGTGGCATACTTGAAGATGGGACAAAAGTGGCAGTCAAGGTTCTGAAAAGAGAGGATCATCATGGTGACCGTGAATTCCTATCTGAAGTAGAGATGCTTAGCCGGCTTCACCATAGAAATTTGGTTAAATTGATTGGTATTTGCGCAGAGGTCAGCTTCCGGTGCCTGGTTTATGAACTCATTCCAAATGGCAGTGTGGAATCCCATTTGCATGGGATGGACAAGGAAAACAGCCCCCTTGATTGGAGTGCTCGGATAAAGATAGCACTTGGGGCTGCTCGTGGACTGGCTTATCTGCATGAAGATTCAAGTCCTCATGTCATACATAGAGACTTCAAGTCTAGTAATATCTTGCTGGAAGATGATTTTACTCCAAAAGTATCCGATTTTGGATTAGCCCGAACAGCAGCTGATGAAGAGAACAGACACATATCAACACGAGTAATGGGAACTTTTGGTTATGTGGCTCCGGAGTATGCAATGACAGGCCATCTTCTTGTGAAGAGTGATGTTTACAGCTATGGTGTTGTCCTCCTTGAGCTCTTGACAGGAAGAAAACCAGTAGACATGTCACGACCTCCCGGTCAAGAGAATCTGGTTGCATGGGCTCGTCCATTGCTCTCAAGTGAAGAAGGAGTGGAAGCAATAACAGATCCATCTCTTGGACCTGATGTGGCTTCTGATAGTGTGGCTAAAGTTGCAGCCATTGCTTCTATGTGTGTACAACCAGAGGTTTCAGACCGTCCATTTATGGGTGAGGTTGTTCAGGCTTTAAAACTAGTGTGCAATGAATGTGATGAGGCAAGAGAAACAGGCTCGAGTTCTACCTCTGTTGATTTCAGTCCTTCTAGACAAGTATCAGACAATTTTCAAGGCCAATCTTCAGCCACCAATTATGATTCTGGAGTTGATATTGAAAATGGGCTGTTGGCATCAGAGTTATTCAGCTCAGCATCCGCAAGATATGGAAAGCGAGTGTCAGGATCATTTAGAAGACATTCTTACTCAGGTCCTCTTAGTACCGGAAGAAGCAAACGGTTATGGCAGATAATTAGAAAGCTTTCTGGTGGCAGTGTCAGTGAACATGGAACTATGTTCAAGTTATGA 3840 0.4437 MGVILALILQLLKLCVIGFVVAFQGSQGSIISPSPAFLPVIHPTGEAPAPIHLGLSWGSSPPRSPSDGFVISPSPKTIHVNPSPSEAPGFIHPKEPWRIIAPSPQEVPNGPFFSHPVTFPPPKSAPTPEKTRESEPSMSPSPAASTITSSYNGAPGPSTAEGNVSPSIQLSPPQSKTPAFSPPVFTPISPAPIAVPSGNLTKNSPVSQPTEHGSLPPKIDERNKSHKPEPAFPAIVPIPSTQLPKYSPVSQPNENGSLPHRDGANNSHIPEPISPAPLVFSFPEHPPVSQPTEHGSLPPTVPRGDINTGHTLEPVSHAPVAQPPTNLPKNSSVSQPTHGNFPPDLHNGTANNDHTHTPAQTMSPSVTPSSPFPVDPPLVHPVIPAASPSKSPAPTVSPALTPSRSFSWKKGGEPVSAPVYKTPKPLPAIVHSQTQAPVVSPALTPSRSFNWKRDGEPVSAPPYKTPKPLPAIVHSTTQAPSSAHVARQFHYAPEPSPNKDYPPASSPSATFYKHHHTRSTINSPAPASSYSVSPSTLKHQDEPIPPSRLPASRHRQHAPSPLNTVGSTVSPFQSPVSQISPAPSPSFKILPHSTKIPIHPPEVSPLRPSSKRPKKPVPPHIQALPPPPPNEDCISLVCSDPYTSTPPGAPCKCVWPMKVSLRLSVSLYTFFPLVSEFASEIAIGVFMKQSQVRIMGADAANLQPDKTIVFIDLVPLGENFDNTTAFLTSERFWHKQVAIKTSYFGDYDVLYVSYPGLPPSPPLPPSSITIVDGGPYSGGGNNSRTIKPLGVDISKRQHKGGISKGMIAIISLSGFLVVVLCFAAAWALFKFRNHSSKLASTPQVVSPSLTKAPGAVSAVGGRLASASTSFRSSIAAYTGSAKTFSMNEIEKATDNFHDSRVLGEGGFGRVYSGILEDGTKVAVKVLKREDHHGDREFLSEVEMLSRLHHRNLVKLIGICAEVSFRCLVYELIPNGSVESHLHGMDKENSPLDWSARIKIALGAARGLAYLHEDSSPHVIHRDFKSSNILLEDDFTPKVSDFGLARTAADEENRHISTRVMGTFGYVAPEYAMTGHLLVKSDVYSYGVVLLELLTGRKPVDMSRPPGQENLVAWARPLLSSEEGVEAITDPSLGPDVASDSVAKVAAIASMCVQPEVSDRPFMGEVVQALKLVCNECDEARETGSSSTSVDFSPSRQVSDNFQGQSSATNYDSGVDIENGLLASELFSSASARYGKRVSGSFRRHSYSGPLSTGRSKRLWQIIRKLSGGSVSEHGTMFKL 1279
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun9g00405 1279 MobiDBLite consensus disorder prediction 369 383 - -
Viun9g00405 1279 MobiDBLite consensus disorder prediction 110 413 - -
Viun9g00405 1279 Gene3D Phosphorylase Kinase; domain 1 868 971 - -
Viun9g00405 1279 FunFam receptor-like serine/threonine-protein kinase ALE2 869 971 - -
Viun9g00405 1279 MobiDBLite consensus disorder prediction 510 540 - -
Viun9g00405 1279 SUPERFAMILY Protein kinase-like (PK-like) 876 1169 IPR011009 -
Viun9g00405 1279 MobiDBLite consensus disorder prediction 196 211 - -
Viun9g00405 1279 ProSitePatterns Protein kinases ATP-binding region signature. 902 924 IPR017441 GO:0005524
Viun9g00405 1279 MobiDBLite consensus disorder prediction 1182 1206 - -
Viun9g00405 1279 ProSiteProfiles Protein kinase domain profile. 896 1172 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun9g00405 1279 Gene3D Transferase(Phosphotransferase) domain 1 972 1193 - -
Viun9g00405 1279 Pfam Protein tyrosine and serine/threonine kinase 899 1169 IPR001245 GO:0004672|GO:0006468
Viun9g00405 1279 MobiDBLite consensus disorder prediction 131 175 - -
Viun9g00405 1279 MobiDBLite consensus disorder prediction 176 190 - -
Viun9g00405 1279 MobiDBLite consensus disorder prediction 390 404 - -
Viun9g00405 1279 MobiDBLite consensus disorder prediction 243 262 - -
Viun9g00405 1279 FunFam Receptor-like serine/threonine-protein kinase ALE2 972 1188 - -
Viun9g00405 1279 MobiDBLite consensus disorder prediction 557 584 - -
Viun9g00405 1279 ProSitePatterns Serine/Threonine protein kinases active-site signature. 1018 1030 IPR008271 GO:0004672|GO:0006468
Viun9g00405 1279 PANTHER OS01G0750732 PROTEIN 625 1194 - -
Viun9g00405 1279 MobiDBLite consensus disorder prediction 323 368 - -
Viun9g00405 1279 CDD STKc_IRAK 902 1170 - -
Viun9g00405 1279 MobiDBLite consensus disorder prediction 439 626 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun9g00405 Viun-Chr9 2870468 2880138 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun9g00405 286 1275 Receptor kinase-like Gene Family AT5G56890 53.410 0.0 876
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_Extensin Viun9g00405 PK_Tyr_Ser-Thr 3.4e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun9g00405 - - gmx:100802309 1996.86