Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun9g00386 ATGGCACTGGATATGGTGGATCCTGTTCCCAGAACCAGGATGGAGGAACAATTAGCAATACAAGAAGCTGCTTCCGCTGGTTTGAAAAGCATGGAGCATTTCATTCGCCTCCTTTCTCCCTCTGCCTGCAATTCTTCTTCTTTTTCTTCCAACAACAACAACCTCGACTGCTCCGAAATCACCGACTTCACCGTCTCTAAGTTCAAACAGGTCATTAACCTTCTCAACCGCACCGGCCACGCCCGCTTCCGCCGTGCACCGCCCCAACCCCAACCCCAGGCCCCACCGCAACCGCAACCGCAACCGCAACCACAACCACAACCTCAACCCCAACAAGGCTTTACTTTGGATTTCGTTAAACCCACCATTCTCAACTCCAAGCCCTGCAACAAAGACGAAACTCTCACTCTCTCCACAACCACCACCACCTCCTCTTCCTTTTTATCCTCCGTCACCAACGACGCCAGCGTCTCCGACGGCAAGATCGGTCCTTTCCTCCCTCCCTCCGCCGCCAAACCCCCTCTCTCCTCCTCCCACCGGAAAAAGTGCCGCGAAGCCGCGCTCTCCGCCAAACCCTCCTGCCACTGCTCCAAGAAAAGGAAATCACGCGTTAAACAAACGATCCGAGTCCCGGCGATAAGTTCCAAGATCGCCGACATCCCGCCGGACGAGTACTCGTGGAGGAAGTACGGGCAAAAACCGATCAAGGGTTCACCTTTTCCTCGTGGGTACTACAAGTGCAGCACCGTCAGAGGGTGTCCGGCGAGGAAGCACGTGGAGCGTGCGCAAGATGACCCGAAGATGCTTATAGTGACGTACGAGGGCGAGCACCGTCACGCGCTGCCGTTACCTGCCGCTACCGGCGGTGGTTTCGGCCTTTGA 882 0.5612 MALDMVDPVPRTRMEEQLAIQEAASAGLKSMEHFIRLLSPSACNSSSFSSNNNNLDCSEITDFTVSKFKQVINLLNRTGHARFRRAPPQPQPQAPPQPQPQPQPQPQPQPQQGFTLDFVKPTILNSKPCNKDETLTLSTTTTTSSSFLSSVTNDASVSDGKIGPFLPPSAAKPPLSSSHRKKCREAALSAKPSCHCSKKRKSRVKQTIRVPAISSKIADIPPDEYSWRKYGQKPIKGSPFPRGYYKCSTVRGCPARKHVERAQDDPKMLIVTYEGEHRHALPLPAATGGGFGL 293
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun9g00386 293 PANTHER WRKY TRANSCRIPTION FACTOR 21-RELATED 17 282 IPR044810 GO:0003700
Viun9g00386 293 MobiDBLite consensus disorder prediction 83 114 - -
Viun9g00386 293 Pfam WRKY DNA -binding domain 223 279 IPR003657 GO:0003700|GO:0006355|GO:0043565
Viun9g00386 293 SMART WRKY_cls 221 281 IPR003657 GO:0003700|GO:0006355|GO:0043565
Viun9g00386 293 MobiDBLite consensus disorder prediction 88 109 - -
Viun9g00386 293 ProSiteProfiles WRKY domain profile. 216 282 IPR003657 GO:0003700|GO:0006355|GO:0043565
Viun9g00386 293 SUPERFAMILY WRKY DNA-binding domain 219 282 IPR036576 GO:0003700|GO:0006355|GO:0043565
Viun9g00386 293 FunFam WRKY transcription factor 65 205 282 - -
Viun9g00386 293 Gene3D WRKY domain 209 283 IPR036576 GO:0003700|GO:0006355|GO:0043565
Viun9g00386 293 Pfam Plant zinc cluster domain 180 219 IPR018872 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun9g00386 Viun-Chr9 2728870 2730392 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun9g00386 6 279 WRKY Transcription Factor Family AT2G24570 52.733 2.86e-92 275
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Viun9g00386 WRKY 2.1e-26 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun9g00386 - - gmx:100127391 421.779
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun9g00386 9 2728870 2730392 Viun9g00386 9 2728870 2730392 ECH
Viun3g05320 3 59603032 59604578 Viun9g00386 9 2728870 2730392 PCT