Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun9g00379 ATGAGTAGTTTCGTGAACGGTGCTTCGCCGATGAGGCAAGCGGTGGCGGAGAGGGAGAGTGATATTGAGGCTGGTCCTGCCACTCACCGCTCCACTGACCTCGAAGACGGAGATTTATCCGATCCGTTTGATATTGCCAGAACTAAGAACGCTTCCATTGAACGCCTCAGGCGATGGAGGCAAGCAGCGCTTGTGCTTAATGCTTCTCGTCGATTTCGTTATACCTTGGACTTGAAAAAAGAAGAAGAGAAGAAACAAATATTGAGAAAGATTAGAGCGCATGCACAAGCCATTAGAGCAGCTTATCTTTTCAAAGCAGCTGGTGGGGTGCCAGGGAATGAACCTATTAAACCTCCTCCGACCCCAATTGCTGGTGAATTTTCAATTGGGCAAGAACAACTTGCTTCAATTTCGAGGGAGCATGACACTGCTGCTCTGCAACAATATGGAGGGGTTGTAGGACTATCAGTTTTGTTGAAAACCAATTTAGAGAAGGGAATTCATGGTGATGATGCTGATTTACTGAAACGTAGGAATTCATTTGGTTCCAACAATTATCCTCGGAAAAAAGGAAGAGGTTTTCTGATGTTTATGTGGGATGCTTGTAAGGACCTGACCTTGGTTATTTTAATGGTAGCTGCAGCAGCTTCACTGGCACTTGGGATAAAATCTGAGGGTATTAAGGAAGGATGGTATGATGGGGGAAGCATTGCTTTTGCAGTTATTCTTGTTATTGTTGTTACAGCTATAAGTGACTATAAGCAGTCTCTTCAGTTTCGAGACCTAAATGAAGAGAAGAGAAATATACACCTGGAGGTTATTAGAAGCGGTAGAAGGGTTGAGATCTCTATATATGATATTGTTGTTGGGGATGTTATACCCCTAAATATTGGTGACCAGGTCCCTGCTGATGGAATTCTTATCACTGGTCACTCTCTTGCAATTGATGAATCAAGTATGACTGGGGAGAGCAAAATTGTCCATAAAGATTCTAAGGATCCTTTTCTGATGTCTGGATGTAAAGTTGCTGATGGCAGTGGAACAATGCTGGTCACTGGTGTTGGTATCAATACTGAATGGGGGCTTCTAATGGCTAGCATCTCAGAAGATACTGGTGAAGAAACACCATTGCAGGTTCGCTTAAATGGTGTAGCTACTTTCATTGGTATTGTTGGACTCTCTGTTGCTGTTGTCGTCCTGGTTGTGCTACTGGCTAGATATTTCTCTGGGCATACTGAAAACCCGGATGGTTCGCCTCAATTTAAAGCTGGCAAGACTAAAGTTGGTGATGCTGTTGATGGTGCAATTAAGATAGTAACTGTTGCGGTCACCATCGTTGTGGTTGCAGTTCCTGAGGGGCTCCCATTAGCAGTTACTTTAACGCTGGCCTACTCGATGAGAAAAATGATGGCAGATAAAGCTTTGGTAAGGAGGCTTTCTGCCTGTGAGACCATGGGCTCTGCCACAACCATTTGTAGTGATAAGACTGGCACATTGACTATGAATGAGATGACTGTGGTTGAGGCTTATGCTGGGGGTAAGAAAATTGATCCTCCCCACAAATTGGAGAATCCTATGCTTCGCTCCCTGCTCATTGAGGGTGTTGCGCTGAATACTAATGGTAGTGTTTATGCACCTGAGGGTGCTAGTGATGTTGAGGTTTCTGGATCACCAACGGAAAAGGCAATTTTACATTGGGGAATACAGCTTGGGATGAATTTTACGGATGCTAGATCCAGGACATCAATTATTCATGTTTTTCCATTCAATTCAGAGAAAAAGAGAGGCGGTGTTGCATTACAAACGGCCGACTCTAACATCCATATACACTGGAAAGGTGCTGCCGAGATAGTCCTAGCCTGCTGTACAGGCTATATTGATGCAAACGACCAGCTGGTGGGGATGGATGAAGAGAAGATGTCATTTTTCAAAAAGGCTATTGAAGACATGGCTGCTGATAGTTTACGTTGTGTTGCCATTGCATATAGATCATACGAAAAGGAAAAAGTTCCAACTAATGAAGAACTACTTGCTCACTGGTCTTTACCAGAGGATGATCTTATTTTACTGGCTATTGTTGGTCTTAAGGATCCTTGTCGACCTGGTGTCAAAGATGCAGTGCTACTTTGTCAAAAGGCTGGGGTTAAGGTGAAAATGGTAACTGGTGACAATGTGAAAACTGCAAAAGCAATTGCTGTGGAATGTGGAATACTTGGTTCATTCGCTGATGCTACAGAACCAAACATCATTGAAGGAAAAACATTTCGTGGCTTATCAGATGCAGAGAGAGATGAAATTGCTGATAGGATATTGGTAATGGGACGGTCATCTCCCAATGACAAATTATTGCTAGTACAAGCATTGAGGAGGAAGGGTCATGTTGTAGCTGTAACTGGTGATGGAACAAATGATGCTCCTGCCCTTCATGAGGCTGATATAGGTCTTGCAATGGGTATCCAAGGAACAGAAGTTGCCAAAGAGAGCTCTGATATCATTATTTTGGATGACAATTTTGCTTCAGTTGTAAAGGTTGTCAGATGGGGACGATCTGTCTATGCAAATATTCAGAAATTTATCCAGTTTCAGCTTACAGTAAATGTGGCCGCCTTAGTGATAAATGTTGTTGCTGCAGTTTCTACTGGTGATGTTCCATTAAATGCAGTGCAGCTTCTTTGGGTAAATCTTATCATGGACACCCTGGGGGCACTAGCCCTGGCAACGGAACCGCCAACTGATCACCTCATGGATCGATCTCCAGTTGGTCGAAGAGAGCCTCTCATAACAAATATTATGTGGAGGAATTTACTGATACAGGCAATGTACCAAGTGTCTGTCTTGCTTGTACTCAATTTCCGAGGTAGAAGCATACTGGGTTTGAACCATGACAACAATGTGCATGCAATCAAAGTGAAGAACACTTTGATATTTAACGCATTTGTTCTCTGTCAAATATTTAATGAATTTAATGCTCGAAAGCCAGATGAATACAACATATTTAAAGGAGTCACAAGAAACTACCTCTTTATGGGTATAATTGGATTAACTCTTGTGCTTCAGATCGTCATCATTGAATTCCTGGGCAAGTTTACAAAAACAGTGAGGCTAAATTGGAAGCAGTGGATCATCTGTGTTATCATCGGATTCATTAGTTGGCCTCTTGCTGTGATTGGGAAATTGATACCCGTGCCTACTACTCCTATCAATAACGTTTTCTCGAAATGTGGATCTTCTAAAAAGAAGGAACACGATGAATCTCAGTAG 3261 0.4262 MSSFVNGASPMRQAVAERESDIEAGPATHRSTDLEDGDLSDPFDIARTKNASIERLRRWRQAALVLNASRRFRYTLDLKKEEEKKQILRKIRAHAQAIRAAYLFKAAGGVPGNEPIKPPPTPIAGEFSIGQEQLASISREHDTAALQQYGGVVGLSVLLKTNLEKGIHGDDADLLKRRNSFGSNNYPRKKGRGFLMFMWDACKDLTLVILMVAAAASLALGIKSEGIKEGWYDGGSIAFAVILVIVVTAISDYKQSLQFRDLNEEKRNIHLEVIRSGRRVEISIYDIVVGDVIPLNIGDQVPADGILITGHSLAIDESSMTGESKIVHKDSKDPFLMSGCKVADGSGTMLVTGVGINTEWGLLMASISEDTGEETPLQVRLNGVATFIGIVGLSVAVVVLVVLLARYFSGHTENPDGSPQFKAGKTKVGDAVDGAIKIVTVAVTIVVVAVPEGLPLAVTLTLAYSMRKMMADKALVRRLSACETMGSATTICSDKTGTLTMNEMTVVEAYAGGKKIDPPHKLENPMLRSLLIEGVALNTNGSVYAPEGASDVEVSGSPTEKAILHWGIQLGMNFTDARSRTSIIHVFPFNSEKKRGGVALQTADSNIHIHWKGAAEIVLACCTGYIDANDQLVGMDEEKMSFFKKAIEDMAADSLRCVAIAYRSYEKEKVPTNEELLAHWSLPEDDLILLAIVGLKDPCRPGVKDAVLLCQKAGVKVKMVTGDNVKTAKAIAVECGILGSFADATEPNIIEGKTFRGLSDAERDEIADRILVMGRSSPNDKLLLVQALRRKGHVVAVTGDGTNDAPALHEADIGLAMGIQGTEVAKESSDIIILDDNFASVVKVVRWGRSVYANIQKFIQFQLTVNVAALVINVVAAVSTGDVPLNAVQLLWVNLIMDTLGALALATEPPTDHLMDRSPVGRREPLITNIMWRNLLIQAMYQVSVLLVLNFRGRSILGLNHDNNVHAIKVKNTLIFNAFVLCQIFNEFNARKPDEYNIFKGVTRNYLFMGIIGLTLVLQIVIIEFLGKFTKTVRLNWKQWIICVIIGFISWPLAVIGKLIPVPTTPINNVFSKCGSSKKKEHDESQ 1086
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun9g00379 1086 FunFam Calcium-transporting ATPase 691 843 - -
Viun9g00379 1086 Pfam Cation transporter/ATPase, N-terminus 154 217 IPR004014 -
Viun9g00379 1086 FunFam Calcium-transporting ATPase 815 1064 - -
Viun9g00379 1086 Pfam haloacid dehalogenase-like hydrolase 489 812 - -
Viun9g00379 1086 FunFam Calcium-transporting ATPase 247 368 - -
Viun9g00379 1086 NCBIfam calcium-translocating P-type ATPase, PMCA-type 141 1062 IPR006408 GO:0005388|GO:0005524|GO:0016020|GO:0070588
Viun9g00379 1086 FunFam Calcium-transporting ATPase 51 107 - -
Viun9g00379 1086 SUPERFAMILY HAD-like 490 903 IPR036412 -
Viun9g00379 1086 Pfam E1-E2 ATPase 270 470 - -
Viun9g00379 1086 SFLD Haloacid Dehalogenase 474 850 - -
Viun9g00379 1086 Gene3D - 173 368 - -
Viun9g00379 1086 Gene3D - 200 1052 - -
Viun9g00379 1086 NCBIfam HAD-IC family P-type ATPase 765 878 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Viun9g00379 1086 NCBIfam HAD-IC family P-type ATPase 433 516 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Viun9g00379 1086 PANTHER CATION TRANSPORTING ATPASE 96 1062 - -
Viun9g00379 1086 MobiDBLite consensus disorder prediction 1 42 - -
Viun9g00379 1086 Pfam Ca2+-ATPase N terminal autoinhibitory domain 39 83 IPR024750 GO:0005516
Viun9g00379 1086 Pfam Cation transporting ATPase, C-terminus 883 1060 IPR006068 -
Viun9g00379 1086 FunFam Calcium-transporting ATPase 9 plasma membrane-type 346 516 - -
Viun9g00379 1086 PRINTS P-type cation-transporting ATPase superfamily signature 713 723 - -
Viun9g00379 1086 PRINTS P-type cation-transporting ATPase superfamily signature 798 817 - -
Viun9g00379 1086 PRINTS P-type cation-transporting ATPase superfamily signature 691 702 - -
Viun9g00379 1086 PRINTS P-type cation-transporting ATPase superfamily signature 492 506 - -
Viun9g00379 1086 PRINTS P-type cation-transporting ATPase superfamily signature 316 330 - -
Viun9g00379 1086 PRINTS P-type cation-transporting ATPase superfamily signature 822 834 - -
Viun9g00379 1086 FunFam Calcium-transporting ATPase 200 257 - -
Viun9g00379 1086 SFLD p-type atpase 474 850 IPR044492 -
Viun9g00379 1086 CDD P-type_ATPase_Ca_PMCA-like 174 931 - -
Viun9g00379 1086 Gene3D - 502 698 IPR023299 GO:0000166
Viun9g00379 1086 Gene3D - 489 843 IPR023214 -
Viun9g00379 1086 FunFam Calcium-transporting ATPase 502 698 - -
Viun9g00379 1086 Gene3D - 51 106 - -
Viun9g00379 1086 SUPERFAMILY Calcium ATPase, transduction domain A 270 365 IPR008250 -
Viun9g00379 1086 SUPERFAMILY Calcium ATPase, transmembrane domain M 158 1062 IPR023298 -
Viun9g00379 1086 ProSitePatterns E1-E2 ATPases phosphorylation site. 494 500 IPR018303 -
Viun9g00379 1086 PRINTS Sodium/potassium-transporting ATPase signature 485 506 - -
Viun9g00379 1086 PRINTS Sodium/potassium-transporting ATPase signature 235 255 - -
Viun9g00379 1086 PRINTS Sodium/potassium-transporting ATPase signature 609 627 - -
Viun9g00379 1086 MobiDBLite consensus disorder prediction 16 42 - -
Viun9g00379 1086 SMART Cation_ATPase_N_a_2 151 222 IPR004014 -
Viun9g00379 1086 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 498 703 IPR023299 GO:0000166
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun9g00379 Viun-Chr9 2647202 2666984 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun9g00379 1 1069 Primary Pumps ATPases AT5G57110 74.579 0.0 1612
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun9g00379 K01537 - gmx:100792945 1917.51