Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun9g00333 ATGCTGTTTTTCTCTGTCTCTTGTTTATGTCTTTGTGTGATGTTTTACTTTGTCTTGAGGATAGTTAAAAGACAAAAACCTGTTGAGGAAGAACTCTCGTTAGACAACAGCACTCCTCAAATAAAGTATGATGTTTTTGTGAGTTTTAGAGGTGAGGACATCCGCGACGGGTTTCTTAGCCATTTGGTTATGGATTTTGAAAGGAAGAAAATAAATGCTTTCGTAGATGTTAAACTTGAGAGAGGAGATGAAGTATGGTCATCACTTGTACGAGCAATTAAAGGGTCTTCCATTTCATTGATCATATTCTCACAACACTATGCTTCTTCTCGTTGGTGTTTACAAGAACTTGTCACAATACTTCAATGTAGAGATAAGTTTGGACAGATTTTGATCCCTGTTTTCTACAAAGTGGAACCCACAGATGTACGACATCAATCATCCAAGAGTTACCAAGATGCATTTGCTAAGCATCAGAGAAAATATCAGACCAACAGGGTGCAAATCTGGAGAGATTCTTTGAAGAAATCTACTATAATATCAGGAATTGCATCATCAAAATATCAGGATGATGCTGAGCTGGTTAAAGAAATAGTGAAGGTTGTTCTGGAAAAGTTGGCTAAACCCTCAGTTAACCTGAAAAGATTGGTTGGAATTGACGAAAAAATTGCAACTGTTGAATCGCTGATAGGAAAAGAACCAGAAGACACTCGACTTATTGGAGTTTGGGGCACGGGAGGTATGGGCAAAACAACTCTCGTGGAAGAAGTGTTTAATAAACTGAAGTTTAAATATGACGGTTCTTACTTTTTAGCCAATGAGAGAGATCAATCAAACAAACATGGAATAATTCCTTTGAAGAAAAGTATTTTCTCTAAATTATTAGGATATGATGTGGATATTGACACACCAAATTCGTTGCCCGAAGATGTTGTTAGGAGAATTGGTGGTATGAAAGTTCTTATTGTTCTTGATGATGTGAATGATTTAGAAGACCTAGAGAAATTACTGGGATCTGTTGATAACTTTGGATCAGGTAGTAGAATAATTGTAACAACCAGAAACAGGCAAGTGCTTAAGGCTAACAAATTTGATGAGGAATACCAGCTAAGAAAATTCAGTTCCGAGGAAGCACTCGAACTTTTCAATTTGAATGTTTTTAACCAAAAAGATCATCAAAGGGAATACAATGAGCTTTCTGAAAGGGTGGTGAATTATGCCCAAGGCGTTCCTTTAGTAGTGAAAGTTTTGGCTGGTCGTTTACGTGGAAACGAAAGGGAAGTATGGGAAAGTGAATTAGACAGGCTTAAGAAAATGCCTCTTAGAGAAGTTTATGATGTCCTAAAATGGAGTTATAATGATCTAGATCGTAAAGAGCAACAAGTTTTTTTAGATCTGGCATGTTTCTTTCTTAGATTGCGAAAATCAGTGAATGTGGGTTCTCTAAAATCATTGTTGAAAGATGGAGAAAGCGACAATTCAGTGGCTGTTGATTTGAAAAGGCTTGAAGATAGAGCTCTTATAACAATTTCTAAGGATCACAGTTTACATGAAATGGCTTTGGAGATTATTCAATCAAAGTCAAGTGAGGAGAGTTTTGTTTTTATGCATGACAGTGTACAAGAAATGGCTTGGGAGATTGTTCGTAGAGAGTCTAGCACACAAGGAAACCGTAGTCGATTGTGGGATCCTGATGATGTTTATGAAGCATTGAAAAATAATAAGGGAAATGAGGCCATAAGAAGCATAAGAATTCAATTGTCAACAATTAAGAAACAAAAGTTAAGCCCTCATATATTTGCCAAGATGAGCATACTACAATTTCTGGAAATTTCTGGGAACTGCAATGATGATTTGTTCCATCAACATTATATTCTTGCTGAAGGACTTCAACTATTGGTGACTGAGCTAAAATTTCTTTACTGGGATCGTTATCCTCTAAAATCCTTGCCAGAAAATTTTTCTACCGAAAAGCTTGTAATATTGTCATTGCAACAAGCCAACATAGAAAAACTTTGGGATGGTGTGAAGAATTTGGTAAATTTAAGAGAACTTGACCTCAATAGTTCTCGCATGTTAAAGGAGCTACCAGATTTATCAAAAGCCACAAATCTTGAAGTATTGGATCTCATGTGTTGCTCTATGGTTAATGCACTTCCCTCATCATTTAAACATCAAAGCAAGCTTAGAATTTTAGATATGAGCTATTGCAGCAAGCTTCAAAATATATCAGATCTTCCCTTGTTACTAAAGACTCTAGATGTTAATAGTTGCAAATCTCTTCAAACTCTACCAGAGTTTCCTGTGTCCCTTGAAACTTTAGATGTTAGAGGTTGTAATTCTCTTCAAACTCTACCAAATCTCCCCCTATCCCTTCAAGTTCTAGACATAGAATTTTGCACTTCACTTCTAACTCTACCAAAGCTTCCTCCATCCCTCAAGATTCTCAAAGCAACAAAATGTGAATCTCTCCAAGTTCTACCAAAGCTCCCCCTATTCTTAGAAACACTAGAAGCCACAAACTGTGAATCTCTTCAAACTCTACCAGAGCTTCCCCAATTACTTGAAACTTTAGACGTCAATGGTTGTAAATCTCTACAAACTTTACCACAGCTTCCCATGAACCTTAAAATTATGGATGTTAGACATTGTGAATATCTTCAAGCTCTTCTAAATCTTCCACTATCCCTTGAAAGTCTAGATTGTACAGGTTTGGAATCTCTCCAAGCTCTACCAAAGTTTCCACAGTTCCTTAAAACACTAGATGTCAGTGGTTGCAAATCTCTTCAAACTTTACCAGAGTTTCCCTTGTTCCTTGAAAATCTAGATGTCAGTGGTTGTGAAGCTCTTCAAACTTTGCCAAAGCTTCCTATGGGCCTTAAATCTCTAGATGTTAGTGGTTGTGTATCCCTTCAAATGTTACCTGAGCTACCTCTATCCCTTGAAACTTTAGATGTCAGAGGTTGTGAATCTCTTCAAATTCTACCAAAACTTCCCATATCCTTAGAAACTATAGATGTCAGAGGTTGTGAATCTCTTCAAACTTTACCTGAGCTTCCATTGTCCCCAAAAGCTCTAGATGTCAAAGACTTTGAACTTCTTCAAACTCTACCAGAACTTCCCCTATCCCTTGAGACTTTAGAGGTCATGAATGGATGTGAATTTGTTCAAGCAATAACAGATCTTTCATTGTCAATTGAAACTCCAGATACAAAATTAAGCATTTCACTAAAGAATGCAAAAAATCTTCCTTCATCTCTTAAAACACTACAAGTCACTGACTGTGAGTCTCTTCAAACCTTACCTAAGCTTCCTCATTCCCTCATAACACTAAACACCCAATGTTGCTCTTCACTTCAAACACTACCTGAGCTACCACAATCCCTCAAAACCCTAAGTGTCAAAAGTTGTCAATCATTTCTATGTCTACCTGAGCTACCATTATGCCTTGAAACACTGGAAGTCAAAAATTGTGAAGCTCTTCAAAATTTTCCAAGACTTCCCCGATTCCTTAAAACTCTGGATGTCAATGGTTGCAAATCTCTTCAAACATTACCAAATCTTCCCTTGAGGCTTGAAACTCTAGATGTCAGAGATTGTGAATCTCTTCAAGCCATACCAAAGCTCCCATTGTCCCTGGAAACTTTGGATTTGAGAGGATGTGAATCTCTTCAAAAGCTACAAAACCTTCCCTTATCTCTTGAAACTCTAGATGTCACAGGTTGTGAATCTCTTCAAATTTTACCCGAGTTTCCCCAATCTTTGAAAACTCTACAATGCACAAAATGTGAATCTCTTCAAACTTTACCACAACTTCCCCAATCACTTAAAACTTTAGATGCTAATGGCTGCAAATCTCTTCAAACTCTACCAAAGCTTCCCCTATCCCTTGAAACTTTAGATGTTAGATGTTGTGATTCTCTTCTAACTCTACCAGAGCTTCCTCTTTCACTTCAAAATCTGGATGTCCGAGGTTGTGAATCCCTTGAAACTCTACCAAAGCTTCCCATGACCCTTAAATCATTAGATTTTAGAGCTTGTGAGTCTCTTCAAACACTACCAGAACTCCCCTTGTCCCTTGAAAATCTAGACGTTCGAGGTTGTGAAGCTCTTCAAAGTCTACCAAAGCTTCCATTTTCATTGAAAATTCTAGAAGCCACAGAATGTGAATCTCTTCTAACTCTTCCAGAGCTGCCCCCATCCCTTAAAATTCTAGATGTTAATGGTTGTAAGTCTCTTCAATTTCTACCACACCTTCCCCAATCCATTGAAATTCTAGATATCAGAGGTTGTGAATCTCTTGAAACTATACAAGAGTTTCCCTTGTCCCTTGAAATTCTAGATACAGAATTGTGCACTTCACTTCAAACTTTTCCTAAGCTTCCCTCTTCTCTTAAAACTCTTGAAGCAACAGTTTGTGAATCTCTTCAAACTTTACCAGAGCTTCCTTGGTCCCTTCAAACTCTAAATGTCCAGCATTGTTCTTCACTTCAAAATTTACCAGAACTTCCCATATCCCTTAAAACTCTAAATGTATCATTTTGCCAATCACTAGAGAGTCTACCGAAGCTTCCACTATCCCTTGAAACTCTAGATGTCAGTGGCTGCATTTCAATTCAGACTTTACCAAAGCTTCCCCTCTCACTTAAAGCTCTAAATGCTAAAGACTGTGAATCTTTGAAGACCGCGTTGTTTCCTTCAACAACAGTTGAACAACTAAAGGAAAATAGAAAATGGCTTCTGTTCTGGAATTGCTTGAACTTGGATGAACATTCTCTACTTTCTATTGGGTTGAATGCACGAATCAACGTTATGAAGTTTGCAAATCACCACCTATCTTCACCAAATCATGATGATCTTGAAAATTACAATGACTATGATGATAAATATGGTTTTTATCAAGCTGGTTACATGTATCCAGGAAGCAGTATCCTAGAGTGGTTGGAGAATAAGACAACAGAGGATTATTTAGTCATTGATCTGTCTTCTCATGCATTTTCCCACAGATTGGGCTTTATTTTCTGCTTCATCCTTGGTCAGTGTGAAGAGACAGAGATGTTTGAAAAACTTGAAGTTAACCTCATCGTAAGTGATGGTGATGGAGAGGGTCAAAAGGACAGTGTTGGAATGTACATAGATATTGGGTCCTGGACAATTGAATCAGATCATGTGTGTGTGATATATGACCAAAGATGTTCTGAGATGCTAAACAAGAGAGCTAAAATTCAAATAAGGTTAAAAATCCAGGTTTCAATTCAAACCAGTGACACAGGAACTACCATACTGTCCAATCCTGCTTTAAAAGGATTTGGGGTAAGCCCTGTTAGCACCTCAGCATATAAAAGTTTCATTCAACAAATGGGATTTCATGACTCAATGTTTCAATTTCATCAATCAAATTGA 5403 0.3742 MLFFSVSCLCLCVMFYFVLRIVKRQKPVEEELSLDNSTPQIKYDVFVSFRGEDIRDGFLSHLVMDFERKKINAFVDVKLERGDEVWSSLVRAIKGSSISLIIFSQHYASSRWCLQELVTILQCRDKFGQILIPVFYKVEPTDVRHQSSKSYQDAFAKHQRKYQTNRVQIWRDSLKKSTIISGIASSKYQDDAELVKEIVKVVLEKLAKPSVNLKRLVGIDEKIATVESLIGKEPEDTRLIGVWGTGGMGKTTLVEEVFNKLKFKYDGSYFLANERDQSNKHGIIPLKKSIFSKLLGYDVDIDTPNSLPEDVVRRIGGMKVLIVLDDVNDLEDLEKLLGSVDNFGSGSRIIVTTRNRQVLKANKFDEEYQLRKFSSEEALELFNLNVFNQKDHQREYNELSERVVNYAQGVPLVVKVLAGRLRGNEREVWESELDRLKKMPLREVYDVLKWSYNDLDRKEQQVFLDLACFFLRLRKSVNVGSLKSLLKDGESDNSVAVDLKRLEDRALITISKDHSLHEMALEIIQSKSSEESFVFMHDSVQEMAWEIVRRESSTQGNRSRLWDPDDVYEALKNNKGNEAIRSIRIQLSTIKKQKLSPHIFAKMSILQFLEISGNCNDDLFHQHYILAEGLQLLVTELKFLYWDRYPLKSLPENFSTEKLVILSLQQANIEKLWDGVKNLVNLRELDLNSSRMLKELPDLSKATNLEVLDLMCCSMVNALPSSFKHQSKLRILDMSYCSKLQNISDLPLLLKTLDVNSCKSLQTLPEFPVSLETLDVRGCNSLQTLPNLPLSLQVLDIEFCTSLLTLPKLPPSLKILKATKCESLQVLPKLPLFLETLEATNCESLQTLPELPQLLETLDVNGCKSLQTLPQLPMNLKIMDVRHCEYLQALLNLPLSLESLDCTGLESLQALPKFPQFLKTLDVSGCKSLQTLPEFPLFLENLDVSGCEALQTLPKLPMGLKSLDVSGCVSLQMLPELPLSLETLDVRGCESLQILPKLPISLETIDVRGCESLQTLPELPLSPKALDVKDFELLQTLPELPLSLETLEVMNGCEFVQAITDLSLSIETPDTKLSISLKNAKNLPSSLKTLQVTDCESLQTLPKLPHSLITLNTQCCSSLQTLPELPQSLKTLSVKSCQSFLCLPELPLCLETLEVKNCEALQNFPRLPRFLKTLDVNGCKSLQTLPNLPLRLETLDVRDCESLQAIPKLPLSLETLDLRGCESLQKLQNLPLSLETLDVTGCESLQILPEFPQSLKTLQCTKCESLQTLPQLPQSLKTLDANGCKSLQTLPKLPLSLETLDVRCCDSLLTLPELPLSLQNLDVRGCESLETLPKLPMTLKSLDFRACESLQTLPELPLSLENLDVRGCEALQSLPKLPFSLKILEATECESLLTLPELPPSLKILDVNGCKSLQFLPHLPQSIEILDIRGCESLETIQEFPLSLEILDTELCTSLQTFPKLPSSLKTLEATVCESLQTLPELPWSLQTLNVQHCSSLQNLPELPISLKTLNVSFCQSLESLPKLPLSLETLDVSGCISIQTLPKLPLSLKALNAKDCESLKTALFPSTTVEQLKENRKWLLFWNCLNLDEHSLLSIGLNARINVMKFANHHLSSPNHDDLENYNDYDDKYGFYQAGYMYPGSSILEWLENKTTEDYLVIDLSSHAFSHRLGFIFCFILGQCEETEMFEKLEVNLIVSDGDGEGQKDSVGMYIDIGSWTIESDHVCVIYDQRCSEMLNKRAKIQIRLKIQVSIQTSDTGTTILSNPALKGFGVSPVSTSAYKSFIQQMGFHDSMFQFHQSN 1800
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun9g00333 1800 Gene3D - 373 456 IPR042197 -
Viun9g00333 1800 ProSiteProfiles TIR domain profile. 41 206 IPR000157 GO:0007165
Viun9g00333 1800 Gene3D Ribonuclease Inhibitor 491 854 IPR032675 -
Viun9g00333 1800 SUPERFAMILY "Winged helix" DNA-binding domain 443 572 IPR036390 -
Viun9g00333 1800 SMART LRR_bac_2 1105 1125 - -
Viun9g00333 1800 SMART LRR_bac_2 894 914 - -
Viun9g00333 1800 SMART LRR_bac_2 1231 1251 - -
Viun9g00333 1800 SMART LRR_bac_2 634 653 - -
Viun9g00333 1800 SMART LRR_bac_2 1168 1188 - -
Viun9g00333 1800 SMART LRR_bac_2 957 977 - -
Viun9g00333 1800 SMART LRR_bac_2 1462 1482 - -
Viun9g00333 1800 SMART LRR_bac_2 1504 1524 - -
Viun9g00333 1800 SMART LRR_bac_2 810 830 - -
Viun9g00333 1800 SMART LRR_bac_2 915 935 - -
Viun9g00333 1800 SMART LRR_bac_2 1336 1356 - -
Viun9g00333 1800 SMART LRR_bac_2 1126 1146 - -
Viun9g00333 1800 SMART LRR_bac_2 679 699 - -
Viun9g00333 1800 SMART LRR_bac_2 747 767 - -
Viun9g00333 1800 SMART LRR_bac_2 768 788 - -
Viun9g00333 1800 SMART LRR_bac_2 1357 1377 - -
Viun9g00333 1800 SMART LRR_bac_2 936 956 - -
Viun9g00333 1800 SMART LRR_bac_2 1147 1167 - -
Viun9g00333 1800 SMART LRR_bac_2 831 851 - -
Viun9g00333 1800 SMART LRR_bac_2 999 1019 - -
Viun9g00333 1800 SMART LRR_bac_2 1189 1209 - -
Viun9g00333 1800 SMART LRR_bac_2 852 872 - -
Viun9g00333 1800 SMART LRR_bac_2 978 998 - -
Viun9g00333 1800 SMART LRR_bac_2 1315 1335 - -
Viun9g00333 1800 SMART LRR_bac_2 1252 1272 - -
Viun9g00333 1800 SMART LRR_bac_2 1378 1398 - -
Viun9g00333 1800 SMART LRR_bac_2 789 809 - -
Viun9g00333 1800 SMART LRR_bac_2 1273 1293 - -
Viun9g00333 1800 SMART LRR_bac_2 1483 1503 - -
Viun9g00333 1800 SMART LRR_bac_2 1399 1419 - -
Viun9g00333 1800 SMART LRR_bac_2 1084 1104 - -
Viun9g00333 1800 SMART LRR_bac_2 1294 1314 - -
Viun9g00333 1800 SMART LRR_bac_2 1525 1545 - -
Viun9g00333 1800 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 43 786 IPR044974 GO:0006952
Viun9g00333 1800 Gene3D Ribonuclease Inhibitor 1306 1475 IPR032675 -
Viun9g00333 1800 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 210 466 IPR027417 -
Viun9g00333 1800 Gene3D Ribonuclease Inhibitor 1212 1298 IPR032675 -
Viun9g00333 1800 Gene3D Ribonuclease Inhibitor 1476 1574 IPR032675 -
Viun9g00333 1800 SUPERFAMILY L domain-like 587 905 - -
Viun9g00333 1800 Gene3D Ribonuclease Inhibitor 855 990 IPR032675 -
Viun9g00333 1800 Gene3D - 204 367 IPR027417 -
Viun9g00333 1800 Gene3D Ribonuclease Inhibitor 1046 1211 IPR032675 -
Viun9g00333 1800 Pfam NB-ARC domain 228 452 IPR002182 GO:0043531
Viun9g00333 1800 SUPERFAMILY Toll/Interleukin receptor TIR domain 37 177 IPR035897 -
Viun9g00333 1800 Gene3D - 40 203 IPR035897 -
Viun9g00333 1800 FunFam Disease resistance protein (TIR-NBS-LRR class) 39 208 - -
Viun9g00333 1800 SUPERFAMILY L domain-like 891 1308 - -
Viun9g00333 1800 SMART till_3 42 180 IPR000157 GO:0007165
Viun9g00333 1800 PRINTS Disease resistance protein signature 407 421 - -
Viun9g00333 1800 PRINTS Disease resistance protein signature 724 740 - -
Viun9g00333 1800 PRINTS Disease resistance protein signature 314 328 - -
Viun9g00333 1800 PRINTS Disease resistance protein signature 239 254 - -
Viun9g00333 1800 SUPERFAMILY L domain-like 1287 1561 - -
Viun9g00333 1800 Pfam TIR domain 42 207 IPR000157 GO:0007165
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun9g00333 Viun-Chr9 2241726 2248169 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun9g00333 43 879 WRKY Transcription Factor Family AT4G12020 29.495 2.50e-80 293
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun9g00333 - - vun:114164115 3444.83