Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun9g00331 ATGACGAGACTGGTTAAACCCTTCATTCAGTCAAAAGGGCTTGTAGGAATTGAAGAAAAAATCGTAGAGGTAGAGCTGTTGATACGCAAGGACCCAGAGGACACCACTTTCATTGGAATTTGGGGTATGGCTGGTATTGGCAAGACAACCCTTGCGGAACAAGTATTTAATAAACTACGTTCTGAATATGAAGGTTGTTACTTTTTAGCCAATGAAAAAGAACAATCACACAGGCATGGAATAATTTCTTTGAAAAATGAAATGTTTTCTGCACTATTAGGACATGCCGTGAAAATTGACACACCAACTTCGTTGCCTCAGGAGATTCTAAGGAGAATTAGTTGTATGAAGGTTCTTATTGTTCTTGATGATGTGAATGATTTAGATCACACAGAAAAGTTACTTGGAACTCTTGATAATTTTGGATCGGGTACAAGAATAATTGTAACAACTAGAGATAAGCAAGTGTTGAAGGCCAACAAAGTCGATAAGATCTACCAGGTCAATGAATTCAGTTCAAAGGAAGCTCTTGAACTTTTCAATTTGATTGCCTTTAACCAAAGTGATCATGAGATGGAGTTCAATGAGCTATCGCAGAGGGTGGTCGATTACGCTCATGGCATTCCATTAGTTGTTAAAGTTTTAGCTCGTCTTCTTTGTGGAAGAAACAGGCAAGTATGGGAAAGTGAGTTACACAAGCTTAAGAAAATGTCTCTTACAGAAGTTTATGACGTGATGAAACTCAGTTATAATGGTCTAGATCGCAAAGAAAAGCAAATATTCTTAGACCTGGCATGTTTCTTTCTTGGATCCCATGTAAGGGTAAACGCTGGTGATCTAAAGTATTTACTGAAAGAGGATGAAAATGATGATACAATAGTTGTAGGGTTAGAAAGGCTGAAAGATAAAGCTCTTATAACTTCCTTTGATGATAACTTTGTTTCTATGCATGATGCTTTACAAGAAATGGCTTGGGAGATTGTTCATCAAGAATCTAGAAAACCTGGAAGCAGCACTTGGTTGTTGGATCCAAATGATGACGTTTACAAAGCATTGAAAAATGACAAGTGTCTTTGTGCCATTAGAAGCTTACGAATCCACTTGCCAACAACTGGGAAGAAAAAGCTAATCCCTGGTATATTTGCTGAGATGAGCAGCAGACTACAGTTTCTAGAAATTTCTGTGGAAAATAATGATGATTTGTTTGATCAAGTTTATCCCCTTGCTGAAGAGCTTCAATTTTTGGAAACCGAACTTAGATTTCTTTGTGGGTTGCATTATCCACTGAAATCCTTGCCAGAGAATTTTTCAACGGATAAACTTGTGATATTGAAGTTACAACACGGAAGAATGGAAAAACTTTGGGAGGGACTGAAGAATCTGGTGAATTTGAAAGAGCTTGACCTTATGCACTCCAAGGAATTGAAAAAGCTGCCAGATTTATCACAAGCAACAAATCTTGAAGTTCTGGTCCTCTTGGGTTGTTCTATGTTGACTAGTGTGGATTCGTCTATTTTCTCTCTGCCCAAACTCGAAAGTATTGACCTTTGGGGCTGCGAGTCTCTAACCCTACTTACAAGCAATTCTCAGTTTTGCAACTTCAGTTATCTCAACCTTGATTTTTGCAACAATCTAAGGGAGTTTTCACTGATATCACAGAATATGAAAGAACTGAGATTAGGGTTTACAAAGGTCAAAGTACTTCCTTCATCGTTTGAATGCCACAGCAAGCTTAAATCGCTGCATCTAACGAGAAGTGACATTGAGATGTTACCTTCTTCCTTCAAAAATCTCACTCAACTGCAACATCTAGACATGAACAATTGCAACAAGCTTCGAACAATACCAGAGCTTCCTCCGTCCCTTAAAACCCTAGAAGTCAGCAAGTGCAATTCACTTCAGAATCTGCCAAAGCTTCCATCGTCTCTTAAAACTCTAAATGCTGTTGACTGCAAATCATTGGAGACTGTGTCGTTTCATTCAACAGCTGATGAACAATTAACGGAAAACAAGAAGCGGTATCTTTTCTGGAATTGCAGGAACTTGGATGAAAGTTCTGCGGAGGCTATTGTGGTGAATGCAGAAGTGAATCTCATGGAACTTGCAAACCAGCCTCTCCCTACACCAAGTCAAGAACATGAATTTTACAATGATTATGAATATAATTATCATTCTTATCAAGGTGTTTACGTGTACCCAGGAAGCAGTGTTCCAGCGTGGTTCAAGCACACGGAAACAAATGGTGATATAATAATCGATCTTTCTTCTGCTTCACCTTTCGAATTATTTGGCTTCATTTTTTGCTTCGTCCTTAATAAGTTCCATGAAACAGATATCACTGGCAGACTTGAATTTAACATCACTATAAGCAATGTTGATGTTGGTGAAGGTAAAATAGGCAGTGTCAAAATCTACACAGATTATTATTCAGATTGGTCATATCACGTGTGTGTGATGTTCGACCAAAGATGTTCTGTCACCTTAAATAACATAGCCAGAGAACAAAAGAGATTTAAAATCAATGTTACAGTAGGGGCACGAATCGAGTTCTATGATAATTATCATGAATTGCCGCAGGAGGTTTTAAAAGGATTTGGAGTAAGCATCTCAGCGTATAACACTCAGCAAATTGAATTGTGA 2640 0.3814 MTRLVKPFIQSKGLVGIEEKIVEVELLIRKDPEDTTFIGIWGMAGIGKTTLAEQVFNKLRSEYEGCYFLANEKEQSHRHGIISLKNEMFSALLGHAVKIDTPTSLPQEILRRISCMKVLIVLDDVNDLDHTEKLLGTLDNFGSGTRIIVTTRDKQVLKANKVDKIYQVNEFSSKEALELFNLIAFNQSDHEMEFNELSQRVVDYAHGIPLVVKVLARLLCGRNRQVWESELHKLKKMSLTEVYDVMKLSYNGLDRKEKQIFLDLACFFLGSHVRVNAGDLKYLLKEDENDDTIVVGLERLKDKALITSFDDNFVSMHDALQEMAWEIVHQESRKPGSSTWLLDPNDDVYKALKNDKCLCAIRSLRIHLPTTGKKKLIPGIFAEMSSRLQFLEISVENNDDLFDQVYPLAEELQFLETELRFLCGLHYPLKSLPENFSTDKLVILKLQHGRMEKLWEGLKNLVNLKELDLMHSKELKKLPDLSQATNLEVLVLLGCSMLTSVDSSIFSLPKLESIDLWGCESLTLLTSNSQFCNFSYLNLDFCNNLREFSLISQNMKELRLGFTKVKVLPSSFECHSKLKSLHLTRSDIEMLPSSFKNLTQLQHLDMNNCNKLRTIPELPPSLKTLEVSKCNSLQNLPKLPSSLKTLNAVDCKSLETVSFHSTADEQLTENKKRYLFWNCRNLDESSAEAIVVNAEVNLMELANQPLPTPSQEHEFYNDYEYNYHSYQGVYVYPGSSVPAWFKHTETNGDIIIDLSSASPFELFGFIFCFVLNKFHETDITGRLEFNITISNVDVGEGKIGSVKIYTDYYSDWSYHVCVMFDQRCSVTLNNIAREQKRFKINVTVGARIEFYDNYHELPQEVLKGFGVSISAYNTQQIEL 879
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun9g00331 879 Gene3D - 171 254 IPR042197 -
Viun9g00331 879 SUPERFAMILY "Winged helix" DNA-binding domain 240 333 IPR036390 -
Viun9g00331 879 Gene3D - 9 166 IPR027417 -
Viun9g00331 879 Gene3D Ribonuclease Inhibitor 362 528 IPR032675 -
Viun9g00331 879 Gene3D Ribonuclease Inhibitor 529 674 IPR032675 -
Viun9g00331 879 PRINTS Disease resistance protein signature 205 219 - -
Viun9g00331 879 PRINTS Disease resistance protein signature 112 126 - -
Viun9g00331 879 PRINTS Disease resistance protein signature 37 52 - -
Viun9g00331 879 PRINTS Disease resistance protein signature 596 612 - -
Viun9g00331 879 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 13 549 IPR044974 GO:0006952
Viun9g00331 879 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 6 264 IPR027417 -
Viun9g00331 879 Pfam NB-ARC domain 26 250 IPR002182 GO:0043531
Viun9g00331 879 SUPERFAMILY L domain-like 364 660 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun9g00331 Viun-Chr9 2220828 2223645 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun9g00331 15 699 WRKY Transcription Factor Family AT5G45050 30.417 9.99e-78 273
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun9g00331 - - gsj:114404194 937.562