Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun9g00329 ATGGGCGGTATTGGTAAGACAACCCTAGCAGAAGTAGTATTTCATAGACTACGATCTCAATATCAAGGATCTTACTTCTTAGCCAATGAAAGAGATCAATCAAACAAACATGGACTAATTCATTTGAAGAAAATTATGTTTTCTAGACTGTTAGGACATGAAGTGGATATTGACACTCCAAATTCCTTGCCTGAAAATATTGTTAGGAGAATTGGTTGTATGAAGGTTCTTGTTGTTCTTGACGATGTGAATGATTCAGATCACATAGAAAAACTGTTGGGAAGTCTTGAAAATTTTGGTATGGGTAGTACAGTGATTGTGACAACTCGGGATGAGCAAGTGCTTAGGATTAACAGAGTCAGTAAGACATACAAGGTGAAAGAATTTAGTTCTGACGAAGCACTTGAACTTTTCAACTTGAATGCCTTTAGTGAAAGTAATGAGGCAAAGGAATACGGTGAGATATCAAAATTGGTAGTCGATTATGCGAAAGGCAATCCATTAGTTGTTAAAGTTTTGGCTCATCTTCTTCAAGGAAGAAATAAGGAAGAATGGGAAAGTTTGTTGGGCAAGCTAAAAACAATGCCTCCAAGAGAAGTTTATGATGTAATGAAACTGAGTTATGACAGCTTAGATCGCAAAGAGCAACAAATGTTTCTAGATTTGGCATGTTTCTTTCTTAGAATGCTTGTACCAGTGCAGGTGGGTGATCTGAAATGTTTATTGAAAGACAATGAAAGTGATAATTCAGTGGCTTTTGAGTTAAGAAGACTGGAAGACAAAGCTCTCATAACAATCTCAGAGGACAATACTGTATCAATGCATGATAGTTTACAAGAAATGGCTTGGGAGATTGTTCGCCATGAGTGTGTTGAAGATCCTGGAAGGCGCAGTCGGTTGTGGGATCCTAATGACATCAGTGAAGCTTTGAAAAATGAAAAGGTTAAAGCCTCATTAAATACAATATCTTGCTCCTAA 978 0.3712 MGGIGKTTLAEVVFHRLRSQYQGSYFLANERDQSNKHGLIHLKKIMFSRLLGHEVDIDTPNSLPENIVRRIGCMKVLVVLDDVNDSDHIEKLLGSLENFGMGSTVIVTTRDEQVLRINRVSKTYKVKEFSSDEALELFNLNAFSESNEAKEYGEISKLVVDYAKGNPLVVKVLAHLLQGRNKEEWESLLGKLKTMPPREVYDVMKLSYDSLDRKEQQMFLDLACFFLRMLVPVQVGDLKCLLKDNESDNSVAFELRRLEDKALITISEDNTVSMHDSLQEMAWEIVRHECVEDPGRRSRLWDPNDISEALKNEKVKASLNTISCS 325
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun9g00329 325 Gene3D - 129 212 IPR042197 -
Viun9g00329 325 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 1 307 IPR044974 GO:0006952
Viun9g00329 325 SUPERFAMILY "Winged helix" DNA-binding domain 199 311 IPR036390 -
Viun9g00329 325 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1 222 IPR027417 -
Viun9g00329 325 Gene3D - 1 124 IPR027417 -
Viun9g00329 325 Pfam NB-ARC domain 1 201 IPR002182 GO:0043531
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun9g00329 Viun-Chr9 2218137 2219473 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun9g00329 1 314 WRKY Transcription Factor Family AT5G45050 33.968 8.17e-42 153
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun9g00329 - - var:108330977 551.592