Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun9g00312 ATGGAGGGTCAACAACCTGCTAAACGCAGACGCGTATACTCACTCGAACCCAACAAAGTGGAACAAGCAGCGTTTGCTAGAAGCTACATGAACTATTTGGTGCCGGCATTGATGAAGATCAAGGAAAGAATTACCTCTTCAGAGCACTGTGATGATATTCAGAATGTTGTCAAGTATGAAGTGGACATGGCAATGGTGCACTCGGCGCAGGGTTTTGCATGGAGCGATGCTCTAAGCGTGAAGCTTCAGAGAAATAATAGAGCCAATGCAGATAGTGACACAACCAGCAATGAAGAGGCTGGTGAAGCTTCATCAAGGGTTTGTGGCAAAAGTGGTGAAATGGTGCCATTGAACAACCATTTTCCTTCAAACCCTAGCTTGAAGCCTAGAAGAAGAAGAAGGGGTTTGAGAGAAGAAGAAGAAGATGAAGATGAGTTGAAGAGCCTTAGAATGTTGATACCTGGTGGAGAAGAGATGTGTAGTGAACAAATGGTGACAGAGCTTCAAAGCTATGTAAGCTGTTTGCAAATGCAGGTGAACATTCTTCAGTGCCTCGCAGAGACACATTGA 570 0.4456 MEGQQPAKRRRVYSLEPNKVEQAAFARSYMNYLVPALMKIKERITSSEHCDDIQNVVKYEVDMAMVHSAQGFAWSDALSVKLQRNNRANADSDTTSNEEAGEASSRVCGKSGEMVPLNNHFPSNPSLKPRRRRRGLREEEEDEDELKSLRMLIPGGEEMCSEQMVTELQSYVSCLQMQVNILQCLAETH 189
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun9g00312 189 MobiDBLite consensus disorder prediction 132 146 - -
Viun9g00312 189 MobiDBLite consensus disorder prediction 86 102 - -
Viun9g00312 189 PANTHER TRANSCRIPTION FACTOR IBH1-LIKE 1 23 187 IPR044660 GO:0006355
Viun9g00312 189 MobiDBLite consensus disorder prediction 86 146 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun9g00312 Viun-Chr9 2084749 2085798 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun9g00312 1 187 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G30180 34.225 3.62e-22 86.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun9g00312 - - gmx:100527269 245.358
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun3g05244 3 59009458 59011336 Viun9g00312 9 2084749 2085798 PCT