Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun9g00308 ATGTTGTATTTCTTTGTCTCTTGTTCATTTCTCTGTGTGTTCCTTTTCATTTTCTCTAGGTTATTTCCAAAACTGAATGGTGTAGAGAAAAAACCCATCTCAAACAACAACTCACCTAAAATAAAGTATGATGTTTTTGTTAGCTTCAGGGGTGAAGATATCCGCGATGGGTTCCTTAGCCATCTGACTGAGGCTTTTGACGTGAAGAAAATAAATGCCTTTGTAGATGATAAGCTTGAAAAGGGGGAAGAACTATGGCCGTCACTTGTTGCTGCAATTGGAGGATCATCCATTTCTTTGATCATATTCTCACCAGAATATGCTTCTTCTCGTTGGTGTTTGAAAGAACTTGTGACCATACTTGAATGCAAAGAGAAATATGGACATACCGTCATCCCTGTTTTCTACCATGTAACACCTACAGATGTACGGCATCAATCATCTCAAGGTTACAAAGAAGCATTCTCCGAGCATGCAAGAAAACGTAAGAGTGAGGTTCAACTCTGGAGACGTGTCTTCGAAAAGTCTGCTGATTTATCTGGAATTGAGTCATCAAAATTTCGAAATGATGCTGACATGCTAAAAGCAATAATAGATCTTGTGCTGATGAGGTTGAGGAAATCCGTGGTTATCTCAAAAGGGCTCGTTGGAATCGATAAAAGAATTGCAGATGTAGAATCATTGATACACAGAGATGTAGAGTCTGAAAAAGCCCGTCTTATTGGACTTTGGGGTATGGGTGGTATAGGCAAGACAACCCTTGCAGAAGAAGTATTCAACAAACTACGGTCTAAATATGAAGGTTGTTATTTTTTGGCCAATGAAAGAGAACAGTCAAGTAGAAAAGGAAAAGTTTCTTTGAAGGAAGAAATTTTTTCTGCTCTGTTAGGAGATGTGAAAATTGACACACCCAATTCACTGCCAGAAGATATTGTTAGGAGAATTCGTCAAATGAAGGTTCTCATTATTCTTGATGATGTGAATGACTCAGATCACATAACAGAACTTTTGGGAGCTGTTGACAATTTTGGATCAGGCAGTAGCATAATTGTAACAACCAGAGATGAGCAAGTGCTTAAAGCTAGCAAAGCTGATGAGATATATCATCTTAGAGAATTGACTTCAGATGAAGCTCTTGAACTTTTCAATTTGAATGCCTTTAACCAAAGTGATCATCAAAGGGAGTACGATGAACTCTCAAAAAGGATTGTACATTATGCCAAAGGTCTTCCACTAATTCTGAAAGTTTTGGCTCATCGACTACATGGTAAGAATGAGGAAGTATGGGAAAGTGAGATAGACAAGCTTAAAATGGTTCCTCCTACAAAAGTTTATGATGTTATAAAGCTGAGTTATGACGATTTAGATCGCAAAGAGAAACAGATTTTTCTTGATCTTGCATGTTTTGTTTGCAGATCGCGTTTGAAGATAACTATTGACTGTCTAAAATATTTACTGAAAGATGGTGAAAGAGACAACTCAGTGGTTGTTGCACTAGAAAGGCTTAAAGATAAAGCTCTTATAACATTTTCCAAAGATAATTTGTTATGTATGCATGACAGTATACAAGAAATGGCTTGGGAGATTGTTCGTCAAGAGTCTACTGAGAACCCTGTAAACCGCAGCCGCTTGTGGGATCCTGATGACACATATGAAGCTTTGGAAAATGACAAGGTTAGTGAGGCCATTAGAAGCATACAAATTGACTTGAAAGCACTTAAGGAACAAAAGTTAATGCCTCACATATTTGCTAAGATGTGCAGACTAAGATTCATGGAAATACATGGGTACGATAACTATAATTGCTACAGTCAACTTGTTGCTGAAGAAGAGCTTCAATTTTTGGCGACTGAACTAAGATTTCTTTATTGGGATTTTTACCCTCTAAAATCCTTGCCAGACAAATTTTCTGGGGAAAAGCTTGTGATATTGATATTGGGATCGGGTCGAATGGAAAAACTTTGGGATGGAGTGAAGAATCTGGTGAATTTAAAAGAACTTGACCTCAGAAACTCATTGAGATTGAAAGAGCTGCCGGATTTATCAAAAGCCACAAATATTGAAGTTCTGTGCCTCAGGGAGTGTATTAGTTTAACCAGTTTGCACCCATCTGTTTTCTCTTTGCCTAACCTTGAGACTTTGAACCTTTGTGGGTGCATGCGCCTTACTATACCCGCAACCGATATCCATTTACGCAGTTTTAGTTATCTCGACCTTGATGGGTGTTGTAATCTTATGGAGTTCACACTGACATCAGATAATATGAAAGAACTGAACTTAGAACTCACGAGTATGAAAGCACTTCGCTCATCATTTGGGCATCAACGCAAGCTTGAATTCCTATGTCTTGGTGGAAGTCATATTGAGAGGTTACCTTCATCCTTCGTCAACCTTATACAACTGCTACATCTGGACATAACCTTTTGCGGGAAGCTTTTAGAAATACCAGAGCTTCCTCTTTCCCTGCAAACTCTATATGCAGGAGGCTGCGAATCATTGAAGACTGTATTCTTCCATTCAACGGCAGTTGAACAAATAAAGGAAAACAGGAAGCAGGTTTTGTTCGACAATTGCATGAACTTGGATGAACGTTCTCTGGAGGCTATCGGGTTGAATGCACGAATCAACATCATGAAATTTGCAAACCAACACCTATCTGCGCCAAGGCAAGATGATTTTCAAAATTACAACAACCACTATGATTCTTTTCAAGCCTTTTACGCATATCCAGGAAGCAGTGTTCCAGAATGGTTGGAATACAAGACAAAAATATTCTGTAATTATAGATCTCTCTTCTGCTCCACCTTCCCCTGTATATGGCTTCATATTTTGCTTCGTACTCCTCGGAGAAGTTGA 2856 0.3866 MLYFFVSCSFLCVFLFIFSRLFPKLNGVEKKPISNNNSPKIKYDVFVSFRGEDIRDGFLSHLTEAFDVKKINAFVDDKLEKGEELWPSLVAAIGGSSISLIIFSPEYASSRWCLKELVTILECKEKYGHTVIPVFYHVTPTDVRHQSSQGYKEAFSEHARKRKSEVQLWRRVFEKSADLSGIESSKFRNDADMLKAIIDLVLMRLRKSVVISKGLVGIDKRIADVESLIHRDVESEKARLIGLWGMGGIGKTTLAEEVFNKLRSKYEGCYFLANEREQSSRKGKVSLKEEIFSALLGDVKIDTPNSLPEDIVRRIRQMKVLIILDDVNDSDHITELLGAVDNFGSGSSIIVTTRDEQVLKASKADEIYHLRELTSDEALELFNLNAFNQSDHQREYDELSKRIVHYAKGLPLILKVLAHRLHGKNEEVWESEIDKLKMVPPTKVYDVIKLSYDDLDRKEKQIFLDLACFVCRSRLKITIDCLKYLLKDGERDNSVVVALERLKDKALITFSKDNLLCMHDSIQEMAWEIVRQESTENPVNRSRLWDPDDTYEALENDKVSEAIRSIQIDLKALKEQKLMPHIFAKMCRLRFMEIHGYDNYNCYSQLVAEEELQFLATELRFLYWDFYPLKSLPDKFSGEKLVILILGSGRMEKLWDGVKNLVNLKELDLRNSLRLKELPDLSKATNIEVLCLRECISLTSLHPSVFSLPNLETLNLCGCMRLTIPATDIHLRSFSYLDLDGCCNLMEFTLTSDNMKELNLELTSMKALRSSFGHQRKLEFLCLGGSHIERLPSSFVNLIQLLHLDITFCGKLLEIPELPLSLQTLYAGGCESLKTVFFHSTAVEQIKENRKQVLFDNCMNLDERSLEAIGLNARINIMKFANQHLSAPRQDDFQNYNNHYDSFQAFYAYPGSSVPEWLEYKTKIFCNYRSLFCSTFPCIWLHILLRTPRRS 951
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun9g00308 951 Gene3D - 37 207 IPR035897 -
Viun9g00308 951 Pfam TIR domain 42 201 IPR000157 GO:0007165
Viun9g00308 951 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 43 845 IPR044974 GO:0006952
Viun9g00308 951 Coils Coil 556 576 - -
Viun9g00308 951 Gene3D Ribonuclease Inhibitor 561 750 IPR032675 -
Viun9g00308 951 SUPERFAMILY L domain-like 568 834 - -
Viun9g00308 951 SUPERFAMILY Toll/Interleukin receptor TIR domain 35 181 IPR035897 -
Viun9g00308 951 FunFam Disease resistance protein (TIR-NBS-LRR class) 39 207 - -
Viun9g00308 951 Gene3D - 208 367 IPR027417 -
Viun9g00308 951 SMART till_3 42 179 IPR000157 GO:0007165
Viun9g00308 951 SUPERFAMILY "Winged helix" DNA-binding domain 442 554 IPR036390 -
Viun9g00308 951 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 207 466 IPR027417 -
Viun9g00308 951 Gene3D - 372 456 IPR042197 -
Viun9g00308 951 SMART AAA_5 237 385 IPR003593 GO:0016887
Viun9g00308 951 PRINTS Disease resistance protein signature 240 255 - -
Viun9g00308 951 PRINTS Disease resistance protein signature 659 675 - -
Viun9g00308 951 PRINTS Disease resistance protein signature 407 421 - -
Viun9g00308 951 PRINTS Disease resistance protein signature 314 328 - -
Viun9g00308 951 Pfam NB-ARC domain 224 437 IPR002182 GO:0043531
Viun9g00308 951 Gene3D Ribonuclease Inhibitor 751 845 IPR032675 -
Viun9g00308 951 ProSiteProfiles TIR domain profile. 41 205 IPR000157 GO:0007165
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun9g00308 Viun-Chr9 2063627 2068563 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun9g00308 30 817 WRKY Transcription Factor Family AT4G12020 31.219 3.66e-86 301
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun9g00308 - - vun:114163400 1478.38