Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Viun9g00307 | ATGGCTGGGGACAAAGGAAGCATAACTCTGGAAGAGATCAGGAACGAAACTGTTGATCTGGAACGTATTCCGATTGAGGAAGTGTTTGAGCAATTGAAATGTACCAGGGAAGGTTTGTCCTCCACGGAAGGAGAGAACAGGCTTCAAATATTTGGACCCAACAAACTAGAAGAAAAGAAGGAAAGCAAGTTTCTGAAATTTCTTGGGTTCATGTGGAATCCACTTTCATGGGTCATGGAGGCTGCAGCTATTATGGCAATTGCTCTTGCAAATGGTGAAGGGAAGCCTCCAGATTGGCAAGATTTTGTGGGTATTGTGTGTTTGTTGCTGATCAACTCCACTATCAGTTTCATAGAAGAAAACAATGCTGGAAATGCTGCTGCTGCTCTTATGGCTGGTCTTGCTCCTAAAACAAAGGTTCTTAGAGATGGTAAATGGAGTGAGCAAGAAGCTGCAATTCTAGTCCCGGGAGACATAATCAGCATCAAGCTTGGTGACATTATTCCTGCTGATGCTCGTCTTCTTGAGGGTGATCCTCTTATGGTTGATCAAGCAGCACTGACTGGGGAATCACTTCCAGTTACCAAGCATCCAGGGCAAGAAGTGTTCTCTGGATCAACTTGTAAACAAGGAGAAATTGAAGCCGTTGTGATTGCAACTGGTGTGCACACATTCTTTGGAAAGGCAGCACATTTAGTGGATAGCACCAACCAAGTTGGACATTTCCAGAAGGTTCTTACAGCAATTGGGAACTTCTGCATCTGTTCCATTGCTGTTGGTATGCTGGCTGAGATCATTGTGATGTACCCAATTCAGCACCGCAAGTACAGGGATGGAATTGACAACCTTTTGGTGCTCTTGATTGGAGGAATCCCCATTGCTATGCCTACTGTGTTGTCTGTGACAATGGCCATTGGTTCTCACAAGCTCTCTCAGCAAGGTGCCATCACCAAGAGAATGACTGCCATTGAAGAAATGGCAGGCATGGATGTCCTTTGCAGTGACAAGACAGGAACACTCACCCTCAACAAACTCACTGTTGACAAGAACTTAGTTGAGGTCTTTGCCAAGGGTGTCGACAAGGATCATGTCATCCTTCTTGCTGCCAGGGCAGCCAGGACAGAAAACCAGGATGCCATAGATGCTGCCATTGTTGGAATGCTGGCTGATCCTAAAGAGGCAAGGGCTGGGATAAGAGAGGTGCACTTTCTACCATTCAATCCTGTTGACAAGAGAACTGCTTTGACTTACATTGATTCTGATGGAAATTGGCACAGATCAAGCAAAGGTGCACCTGAGCAGATTATGTCCCTGTGTAACCTCAGGGATGATGCTAAGAAGAAGGTGCATGCTATCATTGACAAGTTTGCAGAAAGAGGGCTTCGTTCACTTGCTGTTGCTAGACAGGAAGTTCCTGAGAAATCAAAAGAAAGTGCTGGTGCTCCATGGCAGTTTGTTGGTTTGTTGTCACTGTTTGATCCCCCAAGACATGACAGTGCCGAAACCATTCGCCGAGCTCTCAACCTTGGTGTCAATGTTAAGATGATTACTGGTGATCAACTTGCCATAGCTAAGGAAACAGGAAGGAGACTTGGAATGGGAACAAACATGTATCCATCTGCTTCATTGCTTGGTCAAGACAAAGATGCAAGTATTGCCGCACTCCCTGTAGAAGAGCTGATTGAGAAGGCAGATGGATTTGCTGGTGTTTTTCCAGAGCACAAATATGAAATCGTGAAGAAGTTGCAAGAGAGGAAGCACATCTGTGGAATGACTGGAGATGGTGTCAATGACGCTCCTGCATTGAAGAAGGCTGATATTGGAATTGCTGTTGCCGATGCTACTGATGCTGCAAGAAGTGCTTCTGACATTGTCTTGACTGAACCCGGATTGAGTGTTATTATAAGCGCAGTCTTAACTAGCAGAGCTATTTTCCAAAGAATGAAGAACTATACGATATATGCAGTATCTATCACAATCCGTATAGTGTTTGGCTTCATGTTCATTGCACTGATCTGGAAATTCGACTTCTCCCCTTTTATGGTTTTGATTATTGCCATCCTGAATGATGGAACAATCATGACAATTTCAAAGGACAGGGTTAAGCCATCTCCCCTACCTGATAGCTGGAAACTGAAAGAAATATTTGCTACTGGGGTTGTGCTTGGAGGTTACTTGGCACTGATGACTGTTATATTCTTCTGGGCAATGAGAGAGACTACTTTCTTCCCTGATAAATTTGGAGTTAGAGATATTCATGACAGTCCAGATGAAATGACCGCTGCTTTGTATCTACAAGTCAGTATAGTTAGCCAGGCTTTGATATTTGTAACCCGTTCACGCAGCTGGTCCTTTGTTGAACGCCCTGGATTGTTGCTAGTGAGTGCTTTCGTTATTGCTCAGCTGATTGCTACATTATTAGCAGTTTATGCAAACTGGGGCTTTGCAAGGATCAAAGGAATTGGGTGGGGTTGGGCAGGAGTTATATGGCTCTACAGCATTGTCTTCTATGTCCCCCTTGACTTCATGAAGTTCGCCATCCGCTACATCTTGAGTGGCAAAGCTTGGTTGAATCTCCTAGAGAACAAGACTGCATTCACCACCAAGAAAGACTATGGTAAAGAGGAGAGGGAAGCTCAATGGGCTCTTGCTCAGAGGACCCTTCATGGACTGCAACCACCAGAAGCTTCTAACATCTTCAATGAGAAGAGCAGTTACAGAGAACTTTCTGAGATTGCTGAGCAAGCCAAGAGAAGAGCTGAAGTTGCAAGGCTTCGTGAGCTTCACACACTAAAGGGACATGTTGAGTCTGTGGTGAAGCTGAAAGGTTTGGACATTGACACAATCCAGCAGCATTACACAGTGTAA | 2868 | 0.447 | MAGDKGSITLEEIRNETVDLERIPIEEVFEQLKCTREGLSSTEGENRLQIFGPNKLEEKKESKFLKFLGFMWNPLSWVMEAAAIMAIALANGEGKPPDWQDFVGIVCLLLINSTISFIEENNAGNAAAALMAGLAPKTKVLRDGKWSEQEAAILVPGDIISIKLGDIIPADARLLEGDPLMVDQAALTGESLPVTKHPGQEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQVGHFQKVLTAIGNFCICSIAVGMLAEIIVMYPIQHRKYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHKLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDKNLVEVFAKGVDKDHVILLAARAARTENQDAIDAAIVGMLADPKEARAGIREVHFLPFNPVDKRTALTYIDSDGNWHRSSKGAPEQIMSLCNLRDDAKKKVHAIIDKFAERGLRSLAVARQEVPEKSKESAGAPWQFVGLLSLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSASLLGQDKDASIAALPVEELIEKADGFAGVFPEHKYEIVKKLQERKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVFGFMFIALIWKFDFSPFMVLIIAILNDGTIMTISKDRVKPSPLPDSWKLKEIFATGVVLGGYLALMTVIFFWAMRETTFFPDKFGVRDIHDSPDEMTAALYLQVSIVSQALIFVTRSRSWSFVERPGLLLVSAFVIAQLIATLLAVYANWGFARIKGIGWGWAGVIWLYSIVFYVPLDFMKFAIRYILSGKAWLNLLENKTAFTTKKDYGKEEREAQWALAQRTLHGLQPPEASNIFNEKSSYRELSEIAEQAKRRAEVARLRELHTLKGHVESVVKLKGLDIDTIQQHYTV | 955 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Viun9g00307 | 955 | SUPERFAMILY | HAD-like | 329 | 639 | IPR036412 | - | |
Viun9g00307 | 955 | Gene3D | - | 904 | 955 | - | - | |
Viun9g00307 | 955 | FunFam | Plasma membrane ATPase | 136 | 220 | - | - | |
Viun9g00307 | 955 | FunFam | Plasma membrane ATPase | 484 | 640 | - | - | |
Viun9g00307 | 955 | SFLD | C1.7: P-type atpase like | 315 | 643 | - | - | |
Viun9g00307 | 955 | CDD | P-type_ATPase_H | 38 | 845 | IPR006534 | GO:0008553|GO:0016020|GO:0120029 | |
Viun9g00307 | 955 | Pfam | E1-E2 ATPase | 135 | 312 | - | - | |
Viun9g00307 | 955 | SUPERFAMILY | Calcium ATPase, transmembrane domain M | 19 | 851 | IPR023298 | - | |
Viun9g00307 | 955 | Gene3D | - | 345 | 492 | IPR023299 | GO:0000166 | |
Viun9g00307 | 955 | NCBIfam | plasma-membrane proton-efflux P-type ATPase | 38 | 810 | IPR006534 | GO:0008553|GO:0016020|GO:0120029 | |
Viun9g00307 | 955 | SUPERFAMILY | Calcium ATPase, transduction domain A | 136 | 233 | IPR008250 | - | |
Viun9g00307 | 955 | ProSitePatterns | E1-E2 ATPases phosphorylation site. | 335 | 341 | IPR018303 | - | |
Viun9g00307 | 955 | PRINTS | H+-transporting ATPase (proton pump) signature | 564 | 580 | IPR001757 | GO:0005215|GO:0005524|GO:0016020|GO:0016887 | |
Viun9g00307 | 955 | PRINTS | H+-transporting ATPase (proton pump) signature | 764 | 785 | IPR001757 | GO:0005215|GO:0005524|GO:0016020|GO:0016887 | |
Viun9g00307 | 955 | PRINTS | H+-transporting ATPase (proton pump) signature | 592 | 608 | IPR001757 | GO:0005215|GO:0005524|GO:0016020|GO:0016887 | |
Viun9g00307 | 955 | PRINTS | H+-transporting ATPase (proton pump) signature | 449 | 467 | IPR001757 | GO:0005215|GO:0005524|GO:0016020|GO:0016887 | |
Viun9g00307 | 955 | PRINTS | H+-transporting ATPase (proton pump) signature | 623 | 648 | IPR001757 | GO:0005215|GO:0005524|GO:0016020|GO:0016887 | |
Viun9g00307 | 955 | Coils | Coil | 906 | 926 | - | - | |
Viun9g00307 | 955 | PANTHER | CALCIUM-TRANSPORTING ATPASE | 22 | 887 | - | - | |
Viun9g00307 | 955 | NCBIfam | HAD-IC family P-type ATPase | 105 | 353 | IPR001757 | GO:0005215|GO:0005524|GO:0016020|GO:0016887 | |
Viun9g00307 | 955 | NCBIfam | HAD-IC family P-type ATPase | 567 | 681 | IPR001757 | GO:0005215|GO:0005524|GO:0016020|GO:0016887 | |
Viun9g00307 | 955 | Gene3D | - | 136 | 220 | - | - | |
Viun9g00307 | 955 | PRINTS | P-type cation-transporting ATPase superfamily signature | 487 | 498 | - | - | |
Viun9g00307 | 955 | PRINTS | P-type cation-transporting ATPase superfamily signature | 592 | 611 | - | - | |
Viun9g00307 | 955 | PRINTS | P-type cation-transporting ATPase superfamily signature | 615 | 627 | - | - | |
Viun9g00307 | 955 | PRINTS | P-type cation-transporting ATPase superfamily signature | 509 | 519 | - | - | |
Viun9g00307 | 955 | PRINTS | P-type cation-transporting ATPase superfamily signature | 333 | 347 | - | - | |
Viun9g00307 | 955 | PRINTS | P-type cation-transporting ATPase superfamily signature | 183 | 197 | - | - | |
Viun9g00307 | 955 | SMART | Cation_ATPase_N_a_2 | 19 | 91 | IPR004014 | - | |
Viun9g00307 | 955 | Pfam | haloacid dehalogenase-like hydrolase | 329 | 606 | - | - | |
Viun9g00307 | 955 | Pfam | Cation transporter/ATPase, N-terminus | 23 | 85 | IPR004014 | - | |
Viun9g00307 | 955 | Gene3D | - | 98 | 819 | - | - | |
Viun9g00307 | 955 | FunFam | ATPase 4 plasma membrane-type | 577 | 819 | - | - | |
Viun9g00307 | 955 | Gene3D | - | 330 | 629 | IPR023214 | - | |
Viun9g00307 | 955 | FunFam | Plasma membrane ATPase | 345 | 492 | - | - | |
Viun9g00307 | 955 | SFLD | p-type atpase | 315 | 643 | IPR044492 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Viun9g00307 | Viun-Chr9 | 2052952 | 2060566 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Viun9g00307 | 9 | 955 | Primary Pumps ATPases | AT4G30190 | 85.306 | 0.0 | 1656 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Viun9g00307 | K01535 | - | gmx:100804422 | 1794.63 |