Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Viun9g00300 | ATGGCTAAAACCCAAATGCCCCCAGGAGTGCTTACTCCAGAGTCACGATTTATGACACTTGCCATGGATAGATTTTTGAATGATATGGAAAGAGAGAAGCCAACCAGGTTCAATGACCAACATCTAAGGATTGCAACTGATAACTACTCTTACTTGTTGGGGTCAGGAGGTTTTGGATCAGTCTATAAGGGAATTTTTAGCGATGGAACCATTGTGGCTGTGAAGGTTCTACATGGGCGTTCAGACAAGAGAAACGAGGAGCAGTTTATGGCTGAAGTGGGAACAATAGGCAAAATTCATCACTTCAATCTGGTTCGGCTATATGGATTTTGCTTCGAAAGAAACCTGATAGCACTGGTTTATGAATTCATGGGGAATGGTTCTCTTGACAAGTATCTTTTTAACCAAAACAATGTCATAGGATTTGAAAGGCTTCATGAGGTTGCAGTTGGGACAGCCAAAGGAATTGCTTATTTGCATGAAGAGTGCCAACAGAGAATAATACACTATGACATCAAACCAGGAAATATTCTGTTGGATGGAAGCTTCAATCCTAAAGTTGCTGATTTTGGTTTGGCCAAGCTTTGCAATAGAGAAAATACTCATCTAACCATGACAAGGGGAAGGGGGACTCCTGGTTATGCTGCACCAGAACTCTGGATGCCAAATTTTCCTGTGACTCACAAGTGTGATGTTTACAGCTTTGGAATGCTGTTGTTTGAAATCATAGGGAGGAGGAGAAACCTTGATGTTGAAGTTGTTGAAAGCCAAGAGTGGTTTCCAATGTTTGTGTGGAAAAAAATTGATGGTGGAGAGTTGAAGGGGTTGATAATAGCATGTGGAATAGAGGAGAAAGATGAGGAGATAGCTGAGAGAATGGTTAGTGTTGCTCTGTTGTGTGTTCAGTATAGGCCTGATTCAAGGCCTGTGATGAGTGATGTGGTAAAAATGTTGGAAGGTTCAGTGGAAGTTCCAAAACCTTTGAACCCATTTCAGCACTTTATGGATGGGAATTTCTCTGCTCATACAACAGATACTGGTGGTTCTTCTGTTGTTTTAACTGACTCTAGCATTGTACATGCTACTACTTGA | 1092 | 0.413 | MAKTQMPPGVLTPESRFMTLAMDRFLNDMEREKPTRFNDQHLRIATDNYSYLLGSGGFGSVYKGIFSDGTIVAVKVLHGRSDKRNEEQFMAEVGTIGKIHHFNLVRLYGFCFERNLIALVYEFMGNGSLDKYLFNQNNVIGFERLHEVAVGTAKGIAYLHEECQQRIIHYDIKPGNILLDGSFNPKVADFGLAKLCNRENTHLTMTRGRGTPGYAAPELWMPNFPVTHKCDVYSFGMLLFEIIGRRRNLDVEVVESQEWFPMFVWKKIDGGELKGLIIACGIEEKDEEIAERMVSVALLCVQYRPDSRPVMSDVVKMLEGSVEVPKPLNPFQHFMDGNFSAHTTDTGGSSVVLTDSSIVHATT | 363 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Viun9g00300 | 363 | PANTHER | OS07G0415500 PROTEIN | 25 | 331 | - | - | |
Viun9g00300 | 363 | FunFam | serine/threonine-protein kinase PBS1-like | 20 | 123 | - | - | |
Viun9g00300 | 363 | SMART | serkin_6 | 47 | 318 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Viun9g00300 | 363 | FunFam | Putative receptor-like protein kinase | 124 | 326 | - | - | |
Viun9g00300 | 363 | SUPERFAMILY | Protein kinase-like (PK-like) | 35 | 337 | IPR011009 | - | |
Viun9g00300 | 363 | ProSitePatterns | Protein kinases ATP-binding region signature. | 53 | 75 | IPR017441 | GO:0005524 | |
Viun9g00300 | 363 | Gene3D | Phosphorylase Kinase; domain 1 | 22 | 123 | - | - | |
Viun9g00300 | 363 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 167 | 179 | IPR008271 | GO:0004672|GO:0006468 | |
Viun9g00300 | 363 | Gene3D | Transferase(Phosphotransferase) domain 1 | 124 | 327 | - | - | |
Viun9g00300 | 363 | ProSiteProfiles | Protein kinase domain profile. | 47 | 332 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Viun9g00300 | 363 | Pfam | Protein tyrosine and serine/threonine kinase | 52 | 318 | IPR001245 | GO:0004672|GO:0006468 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Viun9g00300 | Viun-Chr9 | 1985513 | 1987791 | Dispersed/Tandem |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Viun9g00300 | 36 | 331 | Receptor kinase-like Gene Family | AT5G38280 | 44.554 | 2.48e-81 | 259 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | RLK-Pelle_RLCK-Os | Viun9g00300 | PK_Tyr_Ser-Thr | 8.9e-46 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Viun9g00300 | - | - | gmx:100819737 | 569.311 |