LGRPv2

Gene search

Sequence information

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Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Viun9g00263	ATGGCTTCAACTGAGTTTGGTGAAGACAGTGATAGCAGAGGCGGTATGTGGGTTTTAGAACAGAGGATTGACCAGCCAATGGATGAAGAAGGTGAAAGGCTCAAAAACATGTACAGAGAAAAAAAATTTTCTACACTGTTGCTTCTGCGGCTTGCATATCAGAGTCTTGGAGTAGTGTATGGAGATTTGGGAACTTCCCCCTTATACGTTTTCTATAATACATTTCCTCGTGGAATTGACAACCCGGAGGATGTGATTGGAGCTCTTTCTTTGATTATATACTCTCTTACTCTGGTGCCGCTGGTCAAATATGTTCTTATTGTATTACGAGCGAATGACAATGGTCAAGGTGGAACGTTGGCTCTTTATTCTTTGCTCTGTCGACATGCAAATATTAGAACTATTCCCAACCAGCATCGTACGGATGAACAGCTAACAACATATAGTCGATCTACCATCCGTGAAAAGTCATTTGCCGCGAAAACCAAGAGATGGTTAGAGGAACAACCTTATATTAAGGATATCATTCTTATTCTCGCCCTTGTTGGTACTTGCATGGTGATCGGAGATGGAATTCTTACCCCAGCTATATCTGTTTTATCTGCGGTTGGTGGCATCAAGGTAAATCACGCAGATTTGAGTAACGAGGTAGTGGTGCTGGTTGCTGTTGTTATACTAGTTGGGTTATTCAGCATGCAACATTACGGTACAGATAGAGTTGGTTGGCTCTTTGCTCCAATTGTCCTTCTTTGGTTTCTCCTAATTGGAGGCATAGGCATCTTCAACATCTGTAAATATGATAGCAGTGTTCTAAAAGCTTTCTCACCACTGTATATATACCGCTATCTAAAACGAGGAGGTAGAGATGGTTGGACTTCCCTTGGTGGAATTTTGCTCAGCATAACTGGGACAGAGGCTCTTTTTGCAGACCTAGCCCACTTTCCAGTCTCTTCTGTACAGATTGCATTTACTCTCCTAGTGTTTCCTTGCCTTCTTTTAGCCTACTCTGGACAAGCTGCATACCTTATGCATAACTTGAATCATTCAAATGATGCGTTTTATCGTTCTATTCCAGACAAAATATACTGGCCAGTATTTGTTGTTGCAACAGCAGCAGCTATAGTCGCAAGCCAGGCCACGATATCCGCAACCTTCTCAATTATCAAGCAAGCCAATGCTCATGGTTGTTTCCCAAGAATAAAAGTTGTACATACATCAAAGAAGTTCCTTGGCCAGATATACATTCCAGATATCAATTGGATCCTCATGATTTTATGCATTGCTGTCACAGCTGGGTTTAAAAATCAGAGTCAAATTGGAAATGCATATGGTACTGCAGTGGTGCTAGTGATGCTGGTTACAACGTTGCTTATGATTTTAATCATGATATTAGTGTGGCGCTGCCACTGGATTCTGGTTGTGGTGTTCACTGGTTTATCACTGATAGTGGAATGCACGTACTTCTCTGCTGTACTCTTCAAAGTTGATCAAGGTGGATGGGCTCCTCTTGCAATTGCTGGAGCATTTCTTCTGATCATGTATGTATGGCATTATGGCACTGTGAAACGCTACGAGTTTGAAATGCACAGTAAGGTGTCAATGGCATGGATTCTTGGACTTGGACCAAGTTTAGGACTTGTTCGTGTCCCAGGAATAGGGCTGGTATACACAGAGCTAGCAAGTGGGGTACCCCACATATTTTCTCACTTCATCACAAACCTACCAGCCATCCATTCTGTTGTTGTTTTTGTATGTGTGAAGTATCTTCCTGTCTACACTGTCCCAGAAGATGAAAGGTTCCTTGTGAAGAGGATTGGCCCAAAGAACTTCCACATGTTTCGATGCGTTGCAAGGTACGGATACAAAGATTTGCACAAGAAAGATGAGGACTTTGAGAAAAAGCTTTTCCACAACCTTTTTGTGTTCGTTAAGCTGGAGTCTATGATGGAGGGATGCTCAGATTCAGATGATTACAGTTTATATGAACAACAAACTGAGAGATCAAGAGAAGGTTTACTACTGAACAATAATGCAATCACAGCATCGATGAATATGAATCCAACAGTTTCTTCTTTGGATTCTATAGTCTCAGTTACTTCTCCATCACAGTTGAATGCTACTGTTAGGTCCTCTGGTCATGTGAGCAACCAAACTGAGGTTGATGAAGTTGAGTTTTTGAACAGTTGCAGAGATGCTGGGGTGGTTCACATACTCGGAAACACAGTTGTGATGGCTAGCAGGGATTCAAGATTCTACAAGAAAATAGCTGTGGATTATATATATGCATTTCTCAGGAAGATATGCAGGGAAAATAGTGTGATCTTCAATGTTCCTCATGAGAGTCTCTTAAACGTTGGTCAGGTTTTCTATGTATAG	2376	0.4154	MASTEFGEDSDSRGGMWVLEQRIDQPMDEEGERLKNMYREKKFSTLLLLRLAYQSLGVVYGDLGTSPLYVFYNTFPRGIDNPEDVIGALSLIIYSLTLVPLVKYVLIVLRANDNGQGGTLALYSLLCRHANIRTIPNQHRTDEQLTTYSRSTIREKSFAAKTKRWLEEQPYIKDIILILALVGTCMVIGDGILTPAISVLSAVGGIKVNHADLSNEVVVLVAVVILVGLFSMQHYGTDRVGWLFAPIVLLWFLLIGGIGIFNICKYDSSVLKAFSPLYIYRYLKRGGRDGWTSLGGILLSITGTEALFADLAHFPVSSVQIAFTLLVFPCLLLAYSGQAAYLMHNLNHSNDAFYRSIPDKIYWPVFVVATAAAIVASQATISATFSIIKQANAHGCFPRIKVVHTSKKFLGQIYIPDINWILMILCIAVTAGFKNQSQIGNAYGTAVVLVMLVTTLLMILIMILVWRCHWILVVVFTGLSLIVECTYFSAVLFKVDQGGWAPLAIAGAFLLIMYVWHYGTVKRYEFEMHSKVSMAWILGLGPSLGLVRVPGIGLVYTELASGVPHIFSHFITNLPAIHSVVVFVCVKYLPVYTVPEDERFLVKRIGPKNFHMFRCVARYGYKDLHKKDEDFEKKLFHNLFVFVKLESMMEGCSDSDDYSLYEQQTERSREGLLLNNNAITASMNMNPTVSSLDSIVSVTSPSQLNATVRSSGHVSNQTEVDEVEFLNSCRDAGVVHILGNTVVMASRDSRFYKKIAVDYIYAFLRKICRENSVIFNVPHESLLNVGQVFYV	791

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Annotation information

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Seq ID	Length	Analysis	Description	Start	End	IPR	GO
Viun9g00263	791	PANTHER	OSMOTIC STRESS POTASSIUM TRANSPORTER	41	789	IPR003855	GO:0015079\|GO:0016020\|GO:0071805
Viun9g00263	791	NCBIfam	potassium uptake protein	51	791	IPR003855	GO:0015079\|GO:0016020\|GO:0071805
Viun9g00263	791	Pfam	K+ potassium transporter	53	623	IPR003855	GO:0015079\|GO:0016020\|GO:0071805

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Duplication type information

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Select	Gene	Chromosome	Start	End	Duplicated_type
	Viun9g00263	Viun-Chr9	1701365	1705996	Dispersed/Tandem

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Functional genes information

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Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Viun9g00263	8	791	Inorganic Solute Cotransporters	AT2G35060	76.845	0.0	1204

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Pathway information

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Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Viun9g00263	K03549		-	gmx:100796449	1427.92

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Event-related genes

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Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Viun9g00263	9	1701365	1705996	Viun9g00263	9	1701365	1705996	ECH

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