Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun9g00245 ATGGAAGAAGAAGAAGAGCAAAAGGTTATGGAAAAGGGGTGCAAGGAAACTCCTGTTCGAGTTTATGCTGATGGGATTTATGATCTCTTTCACTTCGGCCATGCCCGTTCTCTTGAGCAAGCTAAGAAACTGTTTCCAAACACTTATCTCCTTGTTGGATGCTGCAATGATGAGATCACCCATAAGTATAAGGGCAAAACTGTTATGACTGAGAAAGAACGCTATGAGTCTCTTCGCCACTGCAGGTGGGTTGATGAAGTTATTCCAGATGCGCCATGGGTAATCACCAAGGAGTTCCTTGACAAGCATCAAATTGACTATGTGGCACATGATAGTCTTCCTTATGCTGATGCAAGTGGAGCTGGAAAGGATGTGTATGAATATGTTAAGTCTGTTGGAAAATTTAAGGAAACAAAGAGGACTGACGGAATTTCTACTTCTGATATTATAATGAGAATTATCAAAGATTATAATCAATATGTAATGCGTAATTTGGACCGTGGTTACACAAGAAAGGAACTAGGTGTCAGCTATGTCAAGGAGAAGAGGTTGAGAATGAATATGGGACTTAAAAAATTGCAGGAGAGAGTGAAGAAACAACAAGAGAAAGTGGGAAAAAAGATTCAAACGGTGGGAAAAATTGCTGGAATGCACCCTAATGAATGGGTTGAAAATGCAGATCGATTGGTAGCTGGGTTTCTTGAGATGTTTGAAGAAGGTTGCCATAAAATGGGAACAGCAATCAGAGACAGAATACAAGAACAATTGAGGGCACAACAGCTGAAATCTCTTCTTTATGATGAGTGGGATGATGATGATTCATTCTATGATGGTGAATACTACTCCGACTAA 852 0.3991 MEEEEEQKVMEKGCKETPVRVYADGIYDLFHFGHARSLEQAKKLFPNTYLLVGCCNDEITHKYKGKTVMTEKERYESLRHCRWVDEVIPDAPWVITKEFLDKHQIDYVAHDSLPYADASGAGKDVYEYVKSVGKFKETKRTDGISTSDIIMRIIKDYNQYVMRNLDRGYTRKELGVSYVKEKRLRMNMGLKKLQERVKKQQEKVGKKIQTVGKIAGMHPNEWVENADRLVAGFLEMFEEGCHKMGTAIRDRIQEQLRAQQLKSLLYDEWDDDDSFYDGEYYSD 283
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun9g00245 283 Coils Coil 183 210 - -
Viun9g00245 283 PANTHER CYTIDYLYLTRANSFERASE 9 274 IPR045049 GO:0004105|GO:0006657
Viun9g00245 283 FunFam Choline-phosphate cytidylyltransferase 2 1 239 - -
Viun9g00245 283 SUPERFAMILY Nucleotidylyl transferase 20 152 - -
Viun9g00245 283 CDD CCT 18 168 IPR041723 -
Viun9g00245 283 Gene3D HUPs 1 239 IPR014729 -
Viun9g00245 283 NCBIfam cytidyltransferase-like domain 20 87 IPR004821 GO:0003824|GO:0009058
Viun9g00245 283 Pfam Cytidylyltransferase-like 22 151 IPR004821 GO:0003824|GO:0009058
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun9g00245 Viun-Chr9 1571770 1576343 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun9g00245 45 281 Acyl Lipid Metabolism Gene Families AT2G32260 77.500 3.14e-133 377
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun9g00245 K00968 - gmx:100791886 508.834
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun9g00245 9 1571770 1576343 Viun9g00245 9 1571770 1576343 ECH