Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun9g00199 ATGTTGAATAAACTTCTGTACTTGAAATGTGTCACTTCCACAGCAACACTACCTTACCCTTTTATCCACCACTACCCGTTCCTCTTTTCTCTTAGTTACCGCACGATCACTTCAAAATCACGCTCATTCGCTGTATCCTACCTCATTGACAATTTTGGGTTCTCCCCTGAATCTGCTTCCAAAACATCTAGCTCCTACAATATTTGTTTTCAGACCCCAGAAAAGCCCGAGGCAGTGATCAGGTTCTTCAGAAATCACGGTTTCTCTAATATGCAAATAAAATCTATGGTTAGAAGGTTACCATGGTTGCTTTCCTGTGACCCATGCAAAAGGGTATTGCCAAAGTTTGAATTTTTAAGCTCAAAGGGTGTATCTAGCTCTGAAATTGTTAACCTAGTGAATAAGTACCCTGCAGTACTGGGTCCAAGCCTGGAGAATCAGATAGTTCCAACCTATGAATTGATATATAAGTTCTTGCAATCTGATGTGAAGACTATTGGTTGTATGTTTGGTAATTTATTGTTCTCTCGCTGCAATCTTCTGGCACACAACATCAGATTGCTGCAAGAGAATGGAGTGAGAGAATCGAACATTGCAAGATTGCTTGGGAACCGTAGTCATGCGGTGTTTGCCTCAAATGATATGGTTAAGTTGGTGAAGGAAGTAAAGGATTTGGGGTTTGATCCTTCAAAAGCAATATTTGCTGTAGCGATGATGGCCATGAAAAGAATTAGTCCTCCCCTGTGGAAGGAGAAAGTTGATACCTTCAAGAAATGGGGTTGGTCGGATGAAGCCTTGTCTGAAGCGTTTAAGAGGCACCCTCACGTTATGTTGACATCCATTAAAAAAATAAATGTTGTGATGAACTTCTGGGTCAATCAGTTGGGTCGGGATGCTTTGGAACTTGTCCATTTTCCGAAGATTTTCGGGTTGAGTATGGAAAAGACAGTCATTCCTAGGGCTCTTGTTGTCCAGCATTTACTTGCTAAAGGCTTGAAGAAAAGGGTCAGCTTTGTTACCCCAATTTCTGTTTCTGAACAGGTATTTCTTGAAAGGTTTGTGACATGTTTTGAGGAGGAATCATGTGAACTATTAAAGCTGTACCAGGAAAAAGTTAGTGTTCAAAGAAAAGAGGAGGTTGGTGCAGCATGA 1152 0.4097 MLNKLLYLKCVTSTATLPYPFIHHYPFLFSLSYRTITSKSRSFAVSYLIDNFGFSPESASKTSSSYNICFQTPEKPEAVIRFFRNHGFSNMQIKSMVRRLPWLLSCDPCKRVLPKFEFLSSKGVSSSEIVNLVNKYPAVLGPSLENQIVPTYELIYKFLQSDVKTIGCMFGNLLFSRCNLLAHNIRLLQENGVRESNIARLLGNRSHAVFASNDMVKLVKEVKDLGFDPSKAIFAVAMMAMKRISPPLWKEKVDTFKKWGWSDEALSEAFKRHPHVMLTSIKKINVVMNFWVNQLGRDALELVHFPKIFGLSMEKTVIPRALVVQHLLAKGLKKRVSFVTPISVSEQVFLERFVTCFEEESCELLKLYQEKVSVQRKEEVGAA 383
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun9g00199 383 Pfam mTERF 250 350 IPR003690 GO:0003690|GO:0006355
Viun9g00199 383 Pfam mTERF 81 228 IPR003690 GO:0003690|GO:0006355
Viun9g00199 383 Gene3D Transcription termination factor 3, mitochondrial 156 366 IPR038538 -
Viun9g00199 383 PANTHER CGI-12 PROTEIN-RELATED 39 358 IPR003690 GO:0003690|GO:0006355
Viun9g00199 383 SMART mt_12 267 298 IPR003690 GO:0003690|GO:0006355
Viun9g00199 383 SMART mt_12 130 161 IPR003690 GO:0003690|GO:0006355
Viun9g00199 383 SMART mt_12 299 333 IPR003690 GO:0003690|GO:0006355
Viun9g00199 383 SMART mt_12 164 194 IPR003690 GO:0003690|GO:0006355
Viun9g00199 383 SMART mt_12 94 125 IPR003690 GO:0003690|GO:0006355
Viun9g00199 383 SMART mt_12 19 55 IPR003690 GO:0003690|GO:0006355
Viun9g00199 383 FunFam Mitochondrial transcription termination factor-like 144 361 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun9g00199 Viun-Chr9 1176653 1177804 Dispersed/Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Viun9g00199 mTERF 1.9e-18 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun9g00199 K15032 - gmx:102663414 497.664