Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun9g00196 ATGTTGAATAAACTTCTGTACTTGAAATGTGTCACTTCCACAGCAACATTGTGTTACCCTTTTATCCACCACTACCCATTCGTCTTTTCTCTTCGTTTTAGCACAGCCACTTCAAATTCACGCCCATTTGCAGTATCCTACCTCATTGACAACTTTGGGTTCTCCCCTGAGTCTGCTTCCAAAACATCTAACTCCTACTGTATTTCTTTCCAGACCCCAGAAAAACCCGAGACGGTGATCAGGTTTTTCAGAAACCACGGTTTCTCTAATATCCAAATAAACTATATGGTTAGAAAGGCACCATGGTTGCTTTCTTGTGACCCCTCCAAAAGGGTATTGCCAAAGTTTGAATTTTTTCTCTCAAAGGGTGTTTCTAGCTCTGAAATTGTTAACCTAGTGAGTAAGTACCCTAGATTTCTGCGTCCAAGCCTGAAGAATCATATACTCCCTACCTATGAATTGATATATAAGTTCTTGCAATCACATGTGAAGACTACTCGTTGTATGTTTGGTAATTCATTTTTCTCTCGCGGGGATCGTCTGGCACGCAACATCAGATTGCTGCTAGAGAATGAAGTGAGAGAATCGAACATTGCAAGATTGCTTGGGAACCATAGTAAGGAGGTGTTCGCCTCAAATGATATAGTTAAGTTGGTGAAGGAAGTAAAGGATTTGGGGTTTGATCCTTCAAAAGCAATTTTTGTTGTAGCGATGATTGCCATAAAAAGGACGAGTCCTTCCCTGTGGAAGGAGAAAGTTGATACCTTCAAGAAATGGGGTTGGTCTGATGAAGCCTTGTCTGAAGCATTTAGGAGGCACCCTCACTGTATGTTGACATCCATCAAAAAAATAAATGTTTTGATGAATCTCTGGGTCAATGAGTTGGGCAGGGATGCTTTGGAACTCGTCCAAGGTCCAAAGATTTTCGGGTTGAGTATGGAAAAGAGAATCATTCCAAGGGCTCGTGTTGTCCAACATTTACTTGCTAAAGGTTTGAGGAAAAGCAGTGCCAGCTTTATTACCCCGATTTGTGTTTCTGAAAAGGTGTTTCTTGAGAGGTTTGTGGCATGTTTTAAGGAGGAATCATGTGAACTATTAAAGCTGTACCAGGAAAATGTTAGTGTTCAAGGATAA 1134 0.4092 MLNKLLYLKCVTSTATLCYPFIHHYPFVFSLRFSTATSNSRPFAVSYLIDNFGFSPESASKTSNSYCISFQTPEKPETVIRFFRNHGFSNIQINYMVRKAPWLLSCDPSKRVLPKFEFFLSKGVSSSEIVNLVSKYPRFLRPSLKNHILPTYELIYKFLQSHVKTTRCMFGNSFFSRGDRLARNIRLLLENEVRESNIARLLGNHSKEVFASNDIVKLVKEVKDLGFDPSKAIFVVAMIAIKRTSPSLWKEKVDTFKKWGWSDEALSEAFRRHPHCMLTSIKKINVLMNLWVNELGRDALELVQGPKIFGLSMEKRIIPRARVVQHLLAKGLRKSSASFITPICVSEKVFLERFVACFKEESCELLKLYQENVSVQG 377
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun9g00196 377 SMART mt_12 130 161 IPR003690 GO:0003690|GO:0006355
Viun9g00196 377 SMART mt_12 299 333 IPR003690 GO:0003690|GO:0006355
Viun9g00196 377 SMART mt_12 94 125 IPR003690 GO:0003690|GO:0006355
Viun9g00196 377 SMART mt_12 267 298 IPR003690 GO:0003690|GO:0006355
Viun9g00196 377 PANTHER CGI-12 PROTEIN-RELATED 40 360 IPR003690 GO:0003690|GO:0006355
Viun9g00196 377 Gene3D Transcription termination factor 3, mitochondrial 161 367 IPR038538 -
Viun9g00196 377 FunFam Mitochondrial transcription termination factor-like 144 362 - -
Viun9g00196 377 Pfam mTERF 81 228 IPR003690 GO:0003690|GO:0006355
Viun9g00196 377 Pfam mTERF 249 350 IPR003690 GO:0003690|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun9g00196 Viun-Chr9 1167666 1169523 Proximal
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Viun9g00196 mTERF 1.6e-14 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun9g00196 K15032 - gmx:102663414 487.263