Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun9g00182 ATGGAATTCTTAAACCAGGAGATAAGCATGCATAGCCCTGAAGGTGAACTTAAAATAAGTTTTGGCTATCAATGCAATAGTGGTAGAGGTATACCTTGCAAAGAAATCAGTAGAACAAGCAGTTTCTCTTGCTTATCCGGTGCTGCCTTAAGTGCAAATGCTACACTTGCCAACACAAATATCTGCAATGGCGTAATAGGAGAAGAAATCCTTCCGAGTTTGGACTCTCCTAAATCGTTTCGAACAGTACCCTCTTCGTCAAGTTTTCCAAAGTTGGACATATTATCATCATCTGTCCATAGTAGTTTTTCAAATCTAAGTTGCAGCCCTTCCACTCCTACTAACATGCTTGAATATGACTCCTGTTCATTAAAATCTATGAGTGCTCCTTCCAGAACTGAAGGTTTTCTTAATGCAATGGATGTTCAAGTTGCTGGAGGAGCGGCTGGTGAAGATAGAGTTCAAGCAGTTTGTTCTGAAGAAAATGGATGGCTCTTCTGTGCAATTTATGATGGCTTCAATGGGAGAGATGCAGCCGACTTTTTGGCGGGTACCCTTTACGACACCATTGTATCTTACTTTAATATGTTAAGTTGTGATTTTGAACCAGATTTCACAAAAGCTTCTGACAATGTGGCTGTGGGTGAATCCTTTCCATATAATTTGGATGATGATAGTCTTATCCTTCAGGAGCATCAATCTCCTTCAAAGTTTAAGGGAAACAATTCTGGTCTTGACTGTTTTGCAAACATTACTCCACCTTCCAAGTCAGAAGCATCCCCTAAATCATTCTCACATAGTACAGTACTTGATGGTCTCCAGCATGTTCTTAGTCAGGTTGAGAATGATTTCTTATGCATGGTTGAGCAGGAAATGGAGGAACGTCCAGATTTAGTTTCTATTGGATCTTGTGTTTTGCTTGTGCTTCTTCATGGTAATGATTTGTATACACTTAATCTCGGTGACAGCAGAGCCGTATTGGCGACATGTTGTACAGATAACAGAGTGAATGGGAATGAAAGATTGAAGGCTATCCAGCTCACGGATTGTCACACTGTTGACAATGAAGCCGAAAGAGCTCGAGTTCTTGCTGATCATCCAGATGATCCTAAAACCATAGTAGCAGGGAAAGTGAAGGGAAAACTGAAGGTTACTCGAGCTTTAGGAGCAGGGTACTTGAAAAAGAAAATTCTGAATGATGCATTAATGGGAATCCTTCGAGTTCCTGATCTTACAAGCCCACCATATATTTCAACTGATCCGTCGTTGAATGTGCACAAAATCTCAGATTCTGACCAATTTGTTATAGTTGCGAGTGATGGTTTATTTGACTTCTTCAGTAATGATGAAGCAGTACAGCTTGTAGAGTCTTATATCTTGAGAAATCCTTTTGGTGATTCAGCAAAATTTCTTATTGAGCAACTAGTTGCAAGAGCAGCTGATTCTGCAGGCTTCAGCATGGAGGAGTTGATGAATGTTCCCGATGGGAGGAGGAGGAAGTACCATGATGATGTGACAGTAATGGTGATCTTCCTTGGCATGAATCAACGGACTTCAAAAGCATCAATTTGCACCTAG 1578 0.4062 MEFLNQEISMHSPEGELKISFGYQCNSGRGIPCKEISRTSSFSCLSGAALSANATLANTNICNGVIGEEILPSLDSPKSFRTVPSSSSFPKLDILSSSVHSSFSNLSCSPSTPTNMLEYDSCSLKSMSAPSRTEGFLNAMDVQVAGGAAGEDRVQAVCSEENGWLFCAIYDGFNGRDAADFLAGTLYDTIVSYFNMLSCDFEPDFTKASDNVAVGESFPYNLDDDSLILQEHQSPSKFKGNNSGLDCFANITPPSKSEASPKSFSHSTVLDGLQHVLSQVENDFLCMVEQEMEERPDLVSIGSCVLLVLLHGNDLYTLNLGDSRAVLATCCTDNRVNGNERLKAIQLTDCHTVDNEAERARVLADHPDDPKTIVAGKVKGKLKVTRALGAGYLKKKILNDALMGILRVPDLTSPPYISTDPSLNVHKISDSDQFVIVASDGLFDFFSNDEAVQLVESYILRNPFGDSAKFLIEQLVARAADSAGFSMEELMNVPDGRRRKYHDDVTVMVIFLGMNQRTSKASICT 525
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun9g00182 525 ProSiteProfiles PPM-type phosphatase domain profile. 136 512 IPR001932 -
Viun9g00182 525 PANTHER PROTEIN PHOSPHATASE 2C 144 510 IPR015655 GO:0004722|GO:0006470
Viun9g00182 525 SUPERFAMILY PP2C-like 149 513 IPR036457 -
Viun9g00182 525 CDD PP2Cc 149 512 IPR001932 -
Viun9g00182 525 Gene3D - 106 521 IPR036457 -
Viun9g00182 525 SMART PP2C_4 127 510 IPR001932 -
Viun9g00182 525 Pfam Protein phosphatase 2C 281 480 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun9g00182 Viun-Chr9 1102309 1105982 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun9g00182 13 522 PP2C-type Phosphatase Gene Family AT3G16560 62.095 0.0 584
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun9g00182 - - gmx:100791404 873.618