Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun9g00175 ATGGATTTGGTGGAGCAGAAGAGGAAGCAGCGAGAATTTGCGTTAGCGTCTGTGTCTGAGGTTTCTTCCTCTTCTTCGTCTGCTTCGCCGGGGGTTGGTGTGTTTGCTGGTGACCGTCTTCAAATTCGGAACGAATCTAACCATATTCTTCTCAGTGTTCATCTTACAGATTTTCAGCTATTCAGGTTAGGTCCTATTGAATCAGTTTGCATGGTGGAAGGGTCTGATGACAAACAGACATCTTATTCCAGTGGAGTGGCTATACAGTTTAGAAATGAGGAAGAGAGTGAGGCCTTCCATTGTGTATTCCAACAATGGAAGAAGGATTTCAATGTTCAAGGAAATTTACCGAATGGAACTAATGTAATAACTTCTAAAAGCAAGTTTGACGAGAAGATAGAGTCATCTTCTGCAAAAATGTATTTTCATTATTATGGACAACTTCTGCATCAACAAAATATGTTGCAGGACTATGTGAGGACAGGAACCTATTATGCTGCGGTTATTGAGAATCGCTCAGATTTCATGGGCCGTGTAGTAGTTGATGTTGGTGCTGGTAGTGGAATTTTGTCATTATTTGCTGCCCAGGCTGGTGCAAAGCACGTTTATGCTGTGGAAGCATCTGAAATGGCAGAGTATGCACGGAAACTTATAGCTGGGAACCCAATACTTGGTCAACGAATTACAGTTATTAAAGGCAAAGTTGAGGATGTTGAACTGCCTGAGAGAGCAGATATTCTGATCTCTGAGCCCATGGGCACCTTGTTAGTCAATGAAAGAATGCTGGAGTCGTATGTCATTGCAAGGGATAGGTTTCTCACCCCTAATGGGAAAATGTTTCCCAGTGTAGGAAGGATTCACATGGCTCCCTTTAGTGATGAATATTTGTTCGTTGAAATTGCTAATAAGGCACTGTTTTGGCAGCAACAAAACTATTATGGTGTTGATTTGACGCCCTTACATGGGACTGCCTTTCAAGGATACTTTTCTCAGCCTGTGGTGGATGCTTTTGATCCAAGGTTGTTAATAGCTGCTCCTATGTTCCATGTGATAGACTTTACCAAAATAAAGGAAGAAGAGCTATATGAAATTGACATTCCTCTCAAATTCGTAGCCACTGTGGGTGCCAGGCTACATGGGTTGGCATGTTGGTTTGATGTACTGTTCAATGGAAGTACTGCTCGAAGGTGGCTTACCACTGCCCCTGGTTCACCTACAACCCACTGGTATCAGTTACGCTGTGTTCTCTCACAGCCAATATATGTTGTGGCAGGGCAAGAAATCACTGGCAGGATGCACTTGATTGCCCACACTGCTCAGAGTTATACAATCTATTTAACATTGTCAGCTAAAACATGGGGCCCTGGTGCTGAACAAGGAGGGATTCTTCAAACATCATCCTGTAAACTTGATCTGAAAGAACCTTACTATAGAATGTCCCAACCTCAAGCTTATCCATTAAACCAGGATCAGCAACCTCAAGTACTTCTACCGTCACAGGATATAAACATCCAATCTCAAGATTTGGATGAGGTGGAGATGATGCAGCAGCCTTCGCCCAAGTCATGTGCTCAAATTGACTCGCTCATGCAGACTGCATAA 1602 0.4301 MDLVEQKRKQREFALASVSEVSSSSSSASPGVGVFAGDRLQIRNESNHILLSVHLTDFQLFRLGPIESVCMVEGSDDKQTSYSSGVAIQFRNEEESEAFHCVFQQWKKDFNVQGNLPNGTNVITSKSKFDEKIESSSAKMYFHYYGQLLHQQNMLQDYVRTGTYYAAVIENRSDFMGRVVVDVGAGSGILSLFAAQAGAKHVYAVEASEMAEYARKLIAGNPILGQRITVIKGKVEDVELPERADILISEPMGTLLVNERMLESYVIARDRFLTPNGKMFPSVGRIHMAPFSDEYLFVEIANKALFWQQQNYYGVDLTPLHGTAFQGYFSQPVVDAFDPRLLIAAPMFHVIDFTKIKEEELYEIDIPLKFVATVGARLHGLACWFDVLFNGSTARRWLTTAPGSPTTHWYQLRCVLSQPIYVVAGQEITGRMHLIAHTAQSYTIYLTLSAKTWGPGAEQGGILQTSSCKLDLKEPYYRMSQPQAYPLNQDQQPQVLLPSQDINIQSQDLDEVEMMQQPSPKSCAQIDSLMQTA 533
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun9g00175 533 PANTHER PROTEIN ARGININE N-METHYLTRANSFERASE 98 464 IPR025799 GO:0016274|GO:0018216
Viun9g00175 533 ProSiteProfiles SAM-dependent methyltransferase PRMT-type domain profile. 134 449 IPR025799 GO:0016274|GO:0018216
Viun9g00175 533 FunFam Probable histone-arginine methyltransferase CARM1 121 281 - -
Viun9g00175 533 Pfam Ribosomal protein L11 methyltransferase (PrmA) 177 249 - -
Viun9g00175 533 Gene3D - 283 490 - -
Viun9g00175 533 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 144 455 IPR029063 -
Viun9g00175 533 CDD AdoMet_MTases 180 280 - -
Viun9g00175 533 FunFam Probable histone-arginine methyltransferase CARM1 283 490 - -
Viun9g00175 533 Gene3D Vaccinia Virus protein VP39 120 281 IPR029063 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun9g00175 Viun-Chr9 1068920 1082242 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun9g00175 141 430 C2H2 Transcription Factor Family AT3G12270 33.333 1.91e-39 150
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun9g00175 9 1068920 1082242 Viun9g00175 9 1068920 1082242 ECH
Viun3g05737 3 62796720 62803005 Viun9g00175 9 1068920 1082242 PCT