Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun9g00172 ATGTCACCACACTTTCAAACACTGTTACCACTTCATCTTAATCTTAACATGTCTTCTTCCTTTCCACCTTCCTGGCTCACTTCCCCTTCATGTTCCACTCTCGACATAGATTCATCTTCACCCACCGCGTTTCTCACAGTTCAGTGGCTAAGGTTTCTTCTCCTATCACCATGCCCTCAACGAGTTATTCTCTCTGGTGTTGATTCCATCTTCTTGCTCATTGTCTTCGCCTTTTCAGCTGTTAAACTCTATTCTAGATTCACTTCCCCTCGCACCTCTTCCTCTTCCGTTACCAAACCCCTTTTGCAGGAGGAAAAACGCTCTCACTATAAAGTCACCTTCTGGTTTAAACTAACCTTCTTGGTGACCACCCTTTTGGTCGCAGCTTATGCTGTTCTTGGTGTCTTGGCCTATACTCAAACGAGTCTTTCTTCATGGACAGTCATAGAGGCACTCTTTCGGCTCTTTCAAGCTGCGGCCAACATAGTGGTTGTGATCCTGTTGGTTCACGAGAACAAGTTCAAAGCTTTGGAGCACCCTTTGTCGCTGAGAATGTATTGGATTGCAAACATGGTGGTTTCGTGCTTTTTTGCCGTTTCGGCTATTGTTCGCTTTGTGATTGTGGATGGAGCGAGATTGGAGCTTAGTTTGAGAGTGGATGACGTGTTTTCTTTGGTTAATCTCCCACTTTCTGCGTTCCTTTTCGTTGTAGCAGTGAAAGGAGTAACGGGGATTCAGGTGGTTGGAATTTCTGATGAAGTGACAGCATATCAGTGCCTTTCCAGCGAGAGAAATTTGAGTCCTTATGCTCATTCTTCGATTTTTTCCAAAATAGTGTGGCTTTGGATGAACCCTTTGCTGAACAAAGGGTACCAAACACCCCTGAAGCTCGATGATGTGCCTTCTCTTCCTCTGGAGTTCCGAGCAGAAAAAATGTCAGAGCTTTTCCAAAGCAATTGGCCGAAGGAAGAGGATAACAGCAAGCAGCCGGTTGGTGTCACCTTGTTTAGATGCTTTTGGAAGCACATAGCTTTCACTGGCTTTCTTGCAGTTATAAGACTTGCGGTTATGTATATTGGTCCAATGCTTATTCAGAGTTTTGTTGATTTCACCGCAAGGAAAGATAGCACCCCTCTTGAAGGACTTATTCTGATTCTGATCCTGTTCTTTGCAAAATCTGTTGAGGTCCTCTCTGTGCACCAATTCAACTTCAACTCTCAGAAACTAGGCATGTTAATGCGTTCCAGCATCATAACTTCCGTGTACAAGAAAGGTTTGAGGCTGTCAAGTTCTTCAAGGCAGACTCATGGCACCGGCCAGATTGTGAACCACATGGCCGTTGATGCACAACAGCTCTCAGATTTGATGATGCAGTTTCATCCCATATGGTTGATGCCACTGCAAGTAGCTGCAGCATTGGCACTTATCTACAACAGTATTGGCGTGTCAGCGCTTGCAGCGCTGCTTGGAACCAGTGTGGTGTTTGTTTTCACTCTCATTCGCACCAAGAAGAGCAACACGTTCCAGTTCAGGATAATGAAGAGCCGTGACCTGAGGATGAAGGCCACGAATGAGTTGCTTAACAACATGCGTGTGATCAAGTTTCAAGCTTGGGAGGAGTACTTTGGCAACAAGATTCAGCAGTTTCGCGAAGCCGAACACGGTTGGATTGGAAAGTTCTTGTACTACTTTGCCATTAACATGGGGGTTCTCACCACTGCTCCTTTGTTGGTATGTGTTCTCACTTTTGGAGCTGCTGTTCTTCAGGGGGTTCCTTTGAACGCTGGCACTGTGTTCACCATCACTTCGGTGATCAAGATTTTGCAAGAGCCTGTGAGAACCTTCCCTCAGGCTCTCATCTTGATCTCCCAAGCGATGATATCTCTTGGGAGGTTGGATGAGTTCATGATGAGCAAGGAAATGGATGAGGGTGCAGTGGAGAGATTGGAGGGATGTGATGGTGACATCGCTGTGGAGATAAAAAATGGAGAATTCTCCTGGGAAGATGCAGATGCAAATGTGTCTCTGAAAGTCGAAGAGTTGGAGATCAAGAGAGGGGAACATGCTGCTGTTGTGGGAACAGTTGGGTCAGGCAAGTCTTCGTTACTGGCTTCTTTGTTAGGGGAAATGATCAAGATATCAGGAAAGGTTAGAGTTTGTGGGTCAATAGCCTATGTAGCACAGACATCATGGATTCAGAATGCAACCATCCAAGAGAACGTATTGTTTGGTTTACCAATGAACAGAGAGAAGTACGAAGAAGCTATAAGAGTGTGTTGCCTGGAAAAGGATCTTGAAATGATGGAATATGGAGACCAAACTGAGATTGGAGAAAGGGGTATTAACCTCAGTGGTGGCCAGAAGCAACGTATACAACTTGCTAGAGCTGTATACCAAGACTGTGACATCTATCTCCTTGATGATGTATTCAGTGCTGTTGATGCACAAACTGGATCATTCATTTTCAAGGAATGTATCATGGGGGCTCTAAAAAACAAGACCATTTTACTTGTAACCCACCAAGTTGACTTCCTGCATAATGTTGACTGTATAATGGTGATGAGAGAAGGGAGAATCGTGCAAAGTGGGAAGTATGATGAACTTCTCAATGCAGGCCTGGATTTTGGTGCACTTGTGGCTGCTCATGAATCATCTATGGAGATTGCAGAATCTAGCGATAAAGGTGGTGGTGATGATTCGATTCAGTCTCCGAAACTGGCTCGAATCCCTTCAAAAGAAAAGGAAAAAGCAGGTGAAAAGCAACCTCAAAATCAAGCTAAGTCAGCTAACACCACTGCAAAGCTCATTGAAGATGAGGAAAGAGAAACCGGTCGTGTGAACCTTCAAGTGTACAAACACTACTTCACTGAAGCATTTGGGTGGTGGGGTATTGTGCTGATGCTGGCAATGTCTCTAACATGGATTTTATCCTTCTTGGCTGGTGATTACTGGCTAGCAATTGGAACTGCAGAAGGCACTAACTTTGCTCCTTCTACATTCATCACTGTCTATGCTTGCATAGCACTTGGTGTAACTGTTGTTGTGATGGCAAGATCAATCTTATTTACCTATTGGGGTCTCAAGACATCTCAAAGCTTCTTCGGTGGAATGCTTCAAAGCATTCTGCATGCACCAATGTCATTCTTTGACACCACTCCCTCTGGCAGAATTTTGAGTCGTGTATCTACTGATATACTTTGGCTTGACATATCAATTCCAATGTTGGTGAACTTCGTAATGGTTGCATACTTCTCGGTGATCAGCATCCTCTTTGTGACATGCCAAAATGCTTGGGAAACGGTCTTCCTCTTAATCCCACTGTTCTATCTTAATAACTGGTATCGGAAATATTACCTTGCATCTTCTCGGGAATTGACTCGCCTTGATTCCATCACCAAAGCTCCTGTGATTCACCACTTTTCAGAAACCATTGCTGGTGTTATGACCATTCGTGGCTTTAAAAAACAGAACGCATTTTGTCAAGAAAATATTGACAAAGTCAATGCTAGTCTGAGAATGGATTTCCACAACAATGGGGCCAATGAATGGCTTGGTTTTCGCTTGGACTACATGGGAGTGGTTTTCCTTAGCATCAGCACTGTTTTTATGATCTTTCTCCCAAGTGCTATCATGAGGCCAGAATATGTTGGTCTGTCTTTGTCCTATGGTTTAGCTCTGAGTAGTCTTTTGGCATTTACCATATCAATGACTTGTTCTGTTGAGAACAAAATGGTTTCAGTTGAGAGAATAAAACAGTTCACCAACCTTCCCTCAGAAGCGCCATGGAAAATGGCTGATACCTCTCCTCCTAAGAATTGGCCCAGCCATGGACACATTGAGTTAAACAATTTGCAGGTTCGGTATCGGCCAAATACTCCTCTGGTTCTCAAAGGAATCTCTCTCACCATTGAAGGAGGAGAAAAGATTGGTGTTGTTGGTCGAACAGGGAGTGGGAAATCAACCCTCATTCAGGTGTTGTTTAGGTTGATTGAGCCTTCAGCTGGGAAAATAATTGTTGATGGTATCAACATTTGTACTGTGGGCCTTCATGATCTCAGATCTCGATTTGGAATTATTCCTCAAGAACCTGTTCTCTTTCAAGGAACAGTACGAAGCAACGTTGATCCCCTTGGCCTGTATTCAGAAGAAGAAATCTGGAAGAGCCTAGAACGTTGCCAACTGAAAGATGTGGTGGCTGCAAAGCCTGAGAAACTTGAGGCTTCAGTGGTTGATGGCGGAGACAATTGGAGTGTGGGGCAAAGACAGCTTCTGTGTTTGGGAAGGATCATGCTAAAACGCAGCAAAATACTGTTCATGGATGAGGCAACAGCATCTGTTGATTCACAAACTGATGCTGTAATACAGAAAATCATCCGAGAGGATTTTGCAGATCGTACAATTATCAGCATTGCTCATAGAATACCTACAGTGATGGACTGTGACAAAGTTTTAGTCATTGATGCAGGGCTTTCAAAAGAATATGACAAGCCATCACGGTTGCTAGAAAGGCCTTCACTTTTTGCAGCATTGGTTAAGGAGTACTCCAATAGATCTGCATAA 4560 0.4395 MSPHFQTLLPLHLNLNMSSSFPPSWLTSPSCSTLDIDSSSPTAFLTVQWLRFLLLSPCPQRVILSGVDSIFLLIVFAFSAVKLYSRFTSPRTSSSSVTKPLLQEEKRSHYKVTFWFKLTFLVTTLLVAAYAVLGVLAYTQTSLSSWTVIEALFRLFQAAANIVVVILLVHENKFKALEHPLSLRMYWIANMVVSCFFAVSAIVRFVIVDGARLELSLRVDDVFSLVNLPLSAFLFVVAVKGVTGIQVVGISDEVTAYQCLSSERNLSPYAHSSIFSKIVWLWMNPLLNKGYQTPLKLDDVPSLPLEFRAEKMSELFQSNWPKEEDNSKQPVGVTLFRCFWKHIAFTGFLAVIRLAVMYIGPMLIQSFVDFTARKDSTPLEGLILILILFFAKSVEVLSVHQFNFNSQKLGMLMRSSIITSVYKKGLRLSSSSRQTHGTGQIVNHMAVDAQQLSDLMMQFHPIWLMPLQVAAALALIYNSIGVSALAALLGTSVVFVFTLIRTKKSNTFQFRIMKSRDLRMKATNELLNNMRVIKFQAWEEYFGNKIQQFREAEHGWIGKFLYYFAINMGVLTTAPLLVCVLTFGAAVLQGVPLNAGTVFTITSVIKILQEPVRTFPQALILISQAMISLGRLDEFMMSKEMDEGAVERLEGCDGDIAVEIKNGEFSWEDADANVSLKVEELEIKRGEHAAVVGTVGSGKSSLLASLLGEMIKISGKVRVCGSIAYVAQTSWIQNATIQENVLFGLPMNREKYEEAIRVCCLEKDLEMMEYGDQTEIGERGINLSGGQKQRIQLARAVYQDCDIYLLDDVFSAVDAQTGSFIFKECIMGALKNKTILLVTHQVDFLHNVDCIMVMREGRIVQSGKYDELLNAGLDFGALVAAHESSMEIAESSDKGGGDDSIQSPKLARIPSKEKEKAGEKQPQNQAKSANTTAKLIEDEERETGRVNLQVYKHYFTEAFGWWGIVLMLAMSLTWILSFLAGDYWLAIGTAEGTNFAPSTFITVYACIALGVTVVVMARSILFTYWGLKTSQSFFGGMLQSILHAPMSFFDTTPSGRILSRVSTDILWLDISIPMLVNFVMVAYFSVISILFVTCQNAWETVFLLIPLFYLNNWYRKYYLASSRELTRLDSITKAPVIHHFSETIAGVMTIRGFKKQNAFCQENIDKVNASLRMDFHNNGANEWLGFRLDYMGVVFLSISTVFMIFLPSAIMRPEYVGLSLSYGLALSSLLAFTISMTCSVENKMVSVERIKQFTNLPSEAPWKMADTSPPKNWPSHGHIELNNLQVRYRPNTPLVLKGISLTIEGGEKIGVVGRTGSGKSTLIQVLFRLIEPSAGKIIVDGINICTVGLHDLRSRFGIIPQEPVLFQGTVRSNVDPLGLYSEEEIWKSLERCQLKDVVAAKPEKLEASVVDGGDNWSVGQRQLLCLGRIMLKRSKILFMDEATASVDSQTDAVIQKIIREDFADRTIISIAHRIPTVMDCDKVLVIDAGLSKEYDKPSRLLERPSLFAALVKEYSNRSA 1519
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun9g00172 1519 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 961 1242 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Viun9g00172 1519 CDD ABC_6TM_ABCC_D1 345 632 IPR044746 GO:0140359
Viun9g00172 1519 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 1279 1513 IPR003439 GO:0005524
Viun9g00172 1519 CDD ABCC_MRP_domain1 658 858 - -
Viun9g00172 1519 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 344 624 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Viun9g00172 1519 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1269 1512 IPR027417 -
Viun9g00172 1519 Gene3D ABC transporter type 1, transmembrane domain 927 1260 IPR036640 GO:0005524|GO:0016020
Viun9g00172 1519 Gene3D ABC transporter type 1, transmembrane domain 330 636 IPR036640 GO:0005524|GO:0016020
Viun9g00172 1519 FunFam ABC transporter C family member 4 641 899 - -
Viun9g00172 1519 Gene3D - 1262 1513 IPR027417 -
Viun9g00172 1519 SUPERFAMILY ABC transporter transmembrane region 961 1259 IPR036640 GO:0005524|GO:0016020
Viun9g00172 1519 FunFam ABC transporter C family member 3 1262 1513 - -
Viun9g00172 1519 Pfam ABC transporter transmembrane region 345 612 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Viun9g00172 1519 Pfam ABC transporter transmembrane region 981 1206 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Viun9g00172 1519 CDD ABC_6TM_ABCC_D2 960 1254 IPR044726 GO:0140359
Viun9g00172 1519 Pfam ABC transporter 1296 1444 IPR003439 GO:0005524
Viun9g00172 1519 MobiDBLite consensus disorder prediction 889 932 - -
Viun9g00172 1519 Pfam ABC transporter 680 809 IPR003439 GO:0005524
Viun9g00172 1519 FunFam ABC transporter C family member 5 927 1260 - -
Viun9g00172 1519 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 658 881 IPR003439 GO:0005524
Viun9g00172 1519 PANTHER ATP-BINDING CASSETTE SUB-FAMILY C 270 1515 - -
Viun9g00172 1519 CDD ABCC_MRP_domain2 1277 1497 - -
Viun9g00172 1519 ProSitePatterns ABC transporters family signature. 783 797 IPR017871 GO:0005524|GO:0016887
Viun9g00172 1519 SUPERFAMILY ABC transporter transmembrane region 335 636 IPR036640 GO:0005524|GO:0016020
Viun9g00172 1519 FunFam ABC transporter C family member 10 327 640 - -
Viun9g00172 1519 Gene3D - 637 901 IPR027417 -
Viun9g00172 1519 SMART AAA_5 1305 1490 IPR003593 GO:0016887
Viun9g00172 1519 SMART AAA_5 685 858 IPR003593 GO:0016887
Viun9g00172 1519 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 656 877 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun9g00172 Viun-Chr9 1049533 1057574 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun9g00172 658 908 Calmodulin-binding Proteins AT2G36910 30.769 1.48e-26 116
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun9g00172 - K05665 vra:106762025 2697.15