Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun9g00166 ATGGAAGGTAACAAGGACGAAGCATTGCGCTGCGTTCGGATCGCAGAGGAAGCAATCGCGTCGGGGAACAAAGACCGCGCCGTCAAATTCCTCAGAATCGCTCAGCGACTAAACCGCGATTTGCCGATTCAATCATTGCTCCAAAAGTGCGAGGGCCTCGATTCTCAGTCATCCACCGCTGCCGCTCATGGCGCGCAGGCCAGCGGTACTTCTTCGCGGCGCGAACCTTTGAACGGGGAGAGGAGTCACGTGAGTTACACTGAGGAGAACGTTCGGCTGATTAGGGAAATCAAAGGAAAGAGCGACTACTACGCGATTCTTGGATTGGAGAGGAGTTGCTCCGTCGAAGAGATTCGGAAAGCGTATAGGAAGCTCTCGCTGAAGGTTCATCCCGATAAGAACAAAGCGCCGGGCTCAGAAGACGCGTTCAAGAAGGTCTCGAAGGCTTTCAAGTGTTTGAGCGATGACGGTTCTAGAAGAATGTATGACCAGACGGGAACCGTCGATGATTTCGACCAGGGCGAGGTGAATCATTTCCGGCGGAGGAGGAGAAGGACGACGACGGCAACCACGACGCGCGATTTCTTCGAAGACGAGTTCGATCCTGACGAGATATTTAGGGCTTTCTTCGGACACTCCGATGTGTTCGGGAGGAACCATGTTTTCAGGCCCCGCGGCATGGGGAATCCCCATAGGACTGAGGTTAATGATGGATCCGGAGGGAGGCATCACAATGTTATGCTTGTGATTCAGCTTTTGCCGCTTTTGATTATTGTTCTGCTCGCGTACTTACCGTTTTCTGAGCCTGAGTATTCCTTGCACAAGCATTATAACTACCAGATTCCGAAAACGACTGAGCTGCACGGTGTGCAGTTCTTCGTGAAATCGCAGGAGTTTGAAGCGAATTATCCGGTGGGGAGTGATGCTCGTGTGGCGGTTGAGGAAAGTGTGTTAAAGGATTACCGGAGTATGCTTCGGAGATACTGTCAGGTGGAGATGCAGAGGCGGAGTTGGAATAGGAATCTGCCTACTCCTCACTGTGATAAGCTGCAGAACTTTGCAGTCATGGCATGA 1074 0.5196 MEGNKDEALRCVRIAEEAIASGNKDRAVKFLRIAQRLNRDLPIQSLLQKCEGLDSQSSTAAAHGAQASGTSSRREPLNGERSHVSYTEENVRLIREIKGKSDYYAILGLERSCSVEEIRKAYRKLSLKVHPDKNKAPGSEDAFKKVSKAFKCLSDDGSRRMYDQTGTVDDFDQGEVNHFRRRRRRTTTATTTRDFFEDEFDPDEIFRAFFGHSDVFGRNHVFRPRGMGNPHRTEVNDGSGGRHHNVMLVIQLLPLLIIVLLAYLPFSEPEYSLHKHYNYQIPKTTELHGVQFFVKSQEFEANYPVGSDARVAVEESVLKDYRSMLRRYCQVEMQRRSWNRNLPTPHCDKLQNFAVMA 357
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun9g00166 357 PRINTS DnaJ domain signature 104 122 IPR001623 -
Viun9g00166 357 PRINTS DnaJ domain signature 122 137 IPR001623 -
Viun9g00166 357 PRINTS DnaJ domain signature 138 158 IPR001623 -
Viun9g00166 357 PRINTS DnaJ domain signature 158 177 IPR001623 -
Viun9g00166 357 FunFam Chaperone protein dnaJ 49 98 221 - -
Viun9g00166 357 Pfam DnaJ domain 102 163 IPR001623 -
Viun9g00166 357 CDD DnaJ 102 155 IPR001623 -
Viun9g00166 357 MobiDBLite consensus disorder prediction 57 75 - -
Viun9g00166 357 SUPERFAMILY Chaperone J-domain 98 181 IPR036869 -
Viun9g00166 357 Gene3D DnaJ domain 99 220 IPR036869 -
Viun9g00166 357 ProSiteProfiles dnaJ domain profile. 102 166 IPR001623 -
Viun9g00166 357 MobiDBLite consensus disorder prediction 57 84 - -
Viun9g00166 357 Pfam Domain of unknown function (DUF1977) 267 337 IPR015399 -
Viun9g00166 357 PANTHER AT29763P-RELATED 1 352 - -
Viun9g00166 357 SMART dnaj_3 101 158 IPR001623 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun9g00166 Viun-Chr9 1009959 1014024 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun9g00166 97 163 SUVH1 or 3-interacting DNAJ domain-containing protein superfamily AT2G01710 36.620 2.94e-07 50.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun9g00166 K09518 - gmx:100820432 542.732