Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun9g00132 ATGGCCACGGAGCAGTTGATGTCCAGTGGCGGTCCGCGCTACGTTCAGATGAAATCCTCGCCACCGCCGTCTCCGCCGGCTGCGACTGCGGAGGAGATGTCATCGGCTCCGTCGTTCCGGCACAGCGGTGCTGAGGCCAATCGGATTTTCGAGGAATTGCCGAAAGCCTCCATCGTCTCCGTGTCTCGCCCCGACGCCAGCGATATCAGCCCCATGCAACTCTCTTACACCATTCAGGTTCAGTACAGACAGTTCAAGTGGGAGCTAATGAAGAAAGCTCATCAAGTGTTTATTTTGCATTTCGCATTAAAGAAACGTGCCATCATTGAGGAAATCCATGAGAAGCAGGAACAGGTTAAAGAATGGCTTCAAAATCTAGGAATTGGAGAACACAATGCTATGGAGCAAGATGACGATGAAGGTGATGATGAAACAATCCCGTTGCATACTGATGAAACTCATGAAAGTGCTAAGGACAGAGATGTTCCATCTAGTGCTGCTCTACCAATTATACGACCAGCCTTGGGAAGACAGCAGTCAATTGCAGATAGGGCAAAGAGAGCAATGCAAGGATATTTGAATCACTTTTTGGGAAATATCAGTATTGTAAATTCTCATGAGGTTTGCAAGTTTTTGGAGGTATCAAAGTTATCTTTTTCACCTGAATATGGCCCCAAGCTAAAGGAAGAATATGTGATGGTGAAACATTTGCCCAAAATCCTGAAGGATGAAGACTCCAGAAAGTGTTGTTTGTCTGACTGTTTCAGTTGCTGTAATGACAACTGGCAAAAGGTATGGGCTGTACTGAAACCTGGATTTTTGGCATTGCTGGCAGATCCTTTTGATACACAGCCGCTGGACATAATTGTTTTTGATGTACTGCCGGCCTCGGATGGGAATGGGGATGGTCGTTTATCACTGGCAAGTGAAATGAAGGAACGTAATCCATTACGCCATTCATTCAAGGTGGCTTGTGGAATCCGCAGTATCAGAATTAGAGTGAAAAGTAGAAGTAAAGTCAAAGATTGGGTTGCTGCAATTAATGATGCTGGACTCAGGCCTCCTGAAGGCTGGTGTCATCCTCACCGTTATGGTTCATTTGCTCCTCCAAGAGGCTTAATTGAAGATGGAAGTCAAGCCCAGTGGTTTATTGATGGGCGAGCGGCATTTGAGGCCATTGCTTCTGCAATTGAGGCTGCAAAATCAGAGATATTTATCTGTGGGTGGTGGCTGTGCCCAGAACTGTATCTACGGCGACCTTTTCACACTCATGCTTCATCAAGGCTTGATAATTTGTTGGAAGGAAAAGCTAAGCAAGGGGTTCAGATTTACATTCTTCTCTACAAAGAGGTGGCTCTTGCTTTGAAAATCAACAGTGTTTATAGCAAGAAAAAGCTTCTTAGCATTCATGAGAATGTGAGGGTATTACGCTATCCTGACCACTTTTCTACTGGTGTTTACCTGTGGTCACACCATGAAAAACTTGTCATTATTGATAACCATATCTGCTTTATTGGAGGACTGGATTTATGCTTTGGTCGTTATGACACATCTGAGCATAAAGTGGTTGATTTCCCTCCTCTAATCTGGCCGGGAAAAGACTATTATAACCCAAGAGAATCTGAACCAAATTCATGGGAAGATACAATGAAAGATGAATTGGATCGTGAGAAATATCCTCGTATGCCTTGGCACGATGTTCATTGTGCCCTTTGGGGACCACCTTGCCGTGACATTGCTAGGCACTTTGTTCAGCGATGGAATTATGCAAAGAGGAACAAAGCTTTATATGAGGAAGCGATACCATTACTAATGCCTCAGCATCATATGGTTATTCCACATTACTTGGGAAGAAGCCGAGAGATACAGATTGAAAGTGGGAACGTAGACAATCAAACAGTTCTTAAAAGAGAAGATTCTTTTTCCTCATCTTCCCAAGATCAAGATATTCCTCTACTTTTGCCCCAGGAGTCTGATGGGTTGGATACTCATGAAGGAGACCAAAAGTGTAATGGTGTAATCTCCTCTCCACATTACCAGGAGAAGCCAAGAAGGATGAGCACTGGTCTTCCCTTTTCATTTCGCAAGGCCAAAATTGTAGCACTTGGTTCAGACACACCAATGAAGGGCTTTGTAGATGATCTGGATTCTGAGTATGATCGTGAGAAAATGCCTCTTGATAGAATGGCTCATTCTGATTTGCAAAATACAGATCCAGAATGGTGGGAGACGCAAGAACGGGGTGACCAGGGAGGTTTTCCTGAGGAATCAGGACAAGTTGGTCCTCTTGCTTCCTGCCGTTGCCAAGTTATTAGGAGCGTGAGTCAATGGTCTGCTGGAACAAGTCAAACCGAAGAGAGCATCCACAGTGCTTATTGTTCTCTTATTGAAAAAGCTGAATACTTCATCTACATTGAGAATCAGTTTTTTATCTCAGGTCTTTCTGGGGATGAGATGATAAGGAATCGTGTGTTAGAAGCTTTATACCGACGAATTATGCGAGCTTACAATGACAAAAAAACTTTCAGGGTTATAATTGTCATACCACTGCTGCCTGGCTTCCAGGGAGGCCTTGATGATAGTGGTGCAGCATCTGTAAGAGCCATAATGCATTGGCAGTATCGAACCATTTGCAGGGGGCAGAATTCCATCTTGCATAATCTTTATGAACTTCTTGGTCCTAAAATACACGACTACATCTCTTTCTATGGTCTAAGGTCTTATGGTAGACTTAATGGGGGCCCTGTGGCAACCAGCCAGGTGTATGTTCACAGTAAAATCATGATTGTTGATGATTGTATAACTTTGATTGGGTCTGCTAATATTAATGATAGGAGCTTACTTGGCTCCAGAGATTCTGAGATTGCCATAGTTATAGAAGACAGAGAGTTGATTGGTTCTTATATGGATGGAAAACCTTGGAAAGCTGGAAAGTTTTCCTCGACCCTTCGATTGTCTTTATGGTCTGAGCACTTGGGTATCCCTACAGGAGAGGACAATCAAATAATGGACCCAGTTGTTGAATCTACTTACAAGGATATTTGGGTGGCAACTGCAAAGACAAATACTGCAATTTACCAGGATGTCTTTTCTTGCGTACCTAATGATCTGATACACACCAGACATGCCTTCAGACAAAGTGTGCTCTTTTGGAAAGAAAGGATTGGTCACACGACCATTGATTTAGGAATAGCCCCAGAAAAATTGGAATCCTATCGTGATGGAGGCATTAAGAACACCGATCCCTTGGAGAGATTAGCATCAGTGAAGGGTCACCTGGTCTCTTTTCCCTTGGAGTTCATGTGTCAGGAAAGTCTGAGACCTGCTTTTAATGAAAGCGAATACTACGCTACTCAAGTTTTCCATTGA 3369 0.4354 MATEQLMSSGGPRYVQMKSSPPPSPPAATAEEMSSAPSFRHSGAEANRIFEELPKASIVSVSRPDASDISPMQLSYTIQVQYRQFKWELMKKAHQVFILHFALKKRAIIEEIHEKQEQVKEWLQNLGIGEHNAMEQDDDEGDDETIPLHTDETHESAKDRDVPSSAALPIIRPALGRQQSIADRAKRAMQGYLNHFLGNISIVNSHEVCKFLEVSKLSFSPEYGPKLKEEYVMVKHLPKILKDEDSRKCCLSDCFSCCNDNWQKVWAVLKPGFLALLADPFDTQPLDIIVFDVLPASDGNGDGRLSLASEMKERNPLRHSFKVACGIRSIRIRVKSRSKVKDWVAAINDAGLRPPEGWCHPHRYGSFAPPRGLIEDGSQAQWFIDGRAAFEAIASAIEAAKSEIFICGWWLCPELYLRRPFHTHASSRLDNLLEGKAKQGVQIYILLYKEVALALKINSVYSKKKLLSIHENVRVLRYPDHFSTGVYLWSHHEKLVIIDNHICFIGGLDLCFGRYDTSEHKVVDFPPLIWPGKDYYNPRESEPNSWEDTMKDELDREKYPRMPWHDVHCALWGPPCRDIARHFVQRWNYAKRNKALYEEAIPLLMPQHHMVIPHYLGRSREIQIESGNVDNQTVLKREDSFSSSSQDQDIPLLLPQESDGLDTHEGDQKCNGVISSPHYQEKPRRMSTGLPFSFRKAKIVALGSDTPMKGFVDDLDSEYDREKMPLDRMAHSDLQNTDPEWWETQERGDQGGFPEESGQVGPLASCRCQVIRSVSQWSAGTSQTEESIHSAYCSLIEKAEYFIYIENQFFISGLSGDEMIRNRVLEALYRRIMRAYNDKKTFRVIIVIPLLPGFQGGLDDSGAASVRAIMHWQYRTICRGQNSILHNLYELLGPKIHDYISFYGLRSYGRLNGGPVATSQVYVHSKIMIVDDCITLIGSANINDRSLLGSRDSEIAIVIEDRELIGSYMDGKPWKAGKFSSTLRLSLWSEHLGIPTGEDNQIMDPVVESTYKDIWVATAKTNTAIYQDVFSCVPNDLIHTRHAFRQSVLFWKERIGHTTIDLGIAPEKLESYRDGGIKNTDPLERLASVKGHLVSFPLEFMCQESLRPAFNESEYYATQVFH 1122
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun9g00132 1122 SMART pld_4 487 514 IPR001736 GO:0003824
Viun9g00132 1122 SMART pld_4 919 946 IPR001736 GO:0003824
Viun9g00132 1122 Coils Coil 105 125 - -
Viun9g00132 1122 MobiDBLite consensus disorder prediction 1 15 - -
Viun9g00132 1122 CDD PH_PLD 203 350 - -
Viun9g00132 1122 MobiDBLite consensus disorder prediction 637 652 - -
Viun9g00132 1122 MobiDBLite consensus disorder prediction 1 41 - -
Viun9g00132 1122 MobiDBLite consensus disorder prediction 637 667 - -
Viun9g00132 1122 SUPERFAMILY PH domain-like 258 350 - -
Viun9g00132 1122 PANTHER PHOSPHOLIPASE D 173 1112 IPR015679 -
Viun9g00132 1122 Pfam Phospholipase D Active site motif 487 514 IPR001736 GO:0003824
Viun9g00132 1122 Gene3D - 255 352 IPR011993 -
Viun9g00132 1122 SUPERFAMILY Phospholipase D/nuclease 335 606 - -
Viun9g00132 1122 CDD PLDc_vPLD1_2_yPLD_like_1 380 524 - -
Viun9g00132 1122 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 919 946 IPR001736 GO:0003824
Viun9g00132 1122 Pfam PLD-like domain 793 966 IPR025202 -
Viun9g00132 1122 CDD PLDc_vPLD1_2_yPLD_like_2 780 963 - -
Viun9g00132 1122 Gene3D Endonuclease Chain A 374 609 - -
Viun9g00132 1122 PIRSF PLD_euk 617 1122 IPR016555 GO:0004630|GO:0006654|GO:0048017
Viun9g00132 1122 PIRSF PLD_euk 27 624 IPR016555 GO:0004630|GO:0006654|GO:0048017
Viun9g00132 1122 MobiDBLite consensus disorder prediction 147 161 - -
Viun9g00132 1122 FunFam Phospholipase 754 973 - -
Viun9g00132 1122 MobiDBLite consensus disorder prediction 134 162 - -
Viun9g00132 1122 SUPERFAMILY Phospholipase D/nuclease 760 969 - -
Viun9g00132 1122 Gene3D Endonuclease Chain A 748 983 - -
Viun9g00132 1122 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 487 514 IPR001736 GO:0003824
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun9g00132 Viun-Chr9 801408 812866 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun9g00132 1 998 Phospholipase D Gene Family (Wang group) AT3G16785 72.183 0.0 1385
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun9g00132 K01115 - gmx:100780514 2125.9
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun9g00132 9 801408 812866 Viun9g00132 9 801408 812866 ECH