Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun9g00116 ATGTCGGAGGGAACCAGTTTGGTGCTGGAATCATCTGAAAATGGTACGGATTTGTCTCAGGAAGACATTGACACCATCGAGGAAACAGCAGAGGAAACAATTTTGTCAAGACAAACTTCTGTCAACCTTGTTCCTTTTATTGGTCAAAGATTTGTATCTCAAGAAGCAGCTTATGAATTTTATTGCAGTTTTGCTAAACAGTGTGGCTTTTCAATTAGACGACACCGAACTCGAGGGAAAGATGGGGTTGGAAGGGGAGTTACAAGGAGGGATTTCACTTGCCATCGTGGTGGTTATCCCCAGATTAAACCTTCTGATGACGGAAAGGTGCAAAGGAACCGCAAATCATCTCGCTGTGGTTGCCAAGCATACATGCGTATTGTGAAAAGGGCAGATTTTGATGTCCCTGAATGGCGTGTTACTGGTTTTAGGAACACACACAATCATGAGCTATTAAAATCCAATGAGGTGCGCCTTCTTCCAGCTTATTGTCCGATATCTCCTGATGACAAGAGTCGAATATGCATGTTTGCTAAAGCTGGAATGTCAGTAAGGCAGATGTTAAGACTGATGGAGCTGGAGAAAGGTGTCAAACTTGGCTGTCTTCCTTTTACAGAGATAGATGTAAGAAACTTGCTGCAGTCTTTCAGAATTGTGGACAGAGATAATGATGCCATTGATTTGATTGCTATGTGCAAGAGGTTAAAGGATGAAAACCACAACTTCAAATATGAATTCAAAATAGATAGTAATAACAGGCTTGAACATATTGCATGGTCCTACAGTTCATCCATTCAATCATATGAGGCATTTGGCGATGCTGTAGTTTTCGATACCACCTACCGAGTAGATGCTTATGACATGTTGTTGGGATGTTGGCTTGGTGTGGACAATCATGGCATGCCTTGTTTCTTTAGTTGCGCACTTCTACGGGATGAAAACATACAATCTTTCTCATGGGCTCTCAAGGCTTTCTTGGGGTTCATGAAAGGAAAGGCTCCTCAAACAATATTGACGGATCACAACACTTGGCTGAAAGAAGCTATTGCAGTTGAATTGCCTGAAACCAAACATGCTTTTTGTATATGGCATATACTTTCTAAGTTCTCTGATTGGTTTTCTTTACTTCTTGAATCACAATATGATGAGTGGAAAGCTGAGTTCCACCGGCTCTACAATTTGGAACTGGTGGAAGATTTTGAAGAAGGCTGGCGGCAAATGGTTGACAAGTATGGACTCCACACAAATAAACATATCATTAGCCTATATTCATTGAGGACATTTTGGGCTTTACCATTCTTGAGGCGCTACTTCTTTGCAGGATTAACCAGTACATCTCAGTCTGAGTCCATTAATGCTTTCATCCAACGTTTCTTGAGTGCCCAATCTCAACTAGACCGTTTTGTGGAGCAAGTGGCTGATATTGTTGATTTTAATGACCGAGCCGGAGCGAAGCAAAAGATGCAAAGGAAACTGCAAAAAGCGTGCCTCAAAACTGGTTCGCCTATTGAATCCCATGCTGCCACTGTACTCACTCCTTATGCCTTGAATAAACTTCAGGAAGAGCTAGTTTTGGCGCCACAATATGCATCCTTCCTGGTTGATGAAGGTTGTTTCCAGGTCAGACACCATTCTCAGACAGATGGAGGGTGCAAAGTATTTTGGGTTCCTTGTCAAGAGCACATAAGCTGCAGCTGTCATCTGTTTGAGTTTTCAGGCATCTTATGTAGACATGTGCTACGTGTCATGTCAACTAATAACTGTTTTCACGTCCCTGATCAATATTTACCAGGTCGATGGCGAGGCACCGGTTCATCTTCTGTTAACCACTTCCGGGGTACCACTAGTAGGGATCAGCCCGAAAGGATGCAACTTTTGGAATCCATGGTTTCAACATTTTTTGTGGAATCCATTGAAACTGAGGAACGTCTGGATGTTGCTTGCGAGCAAATTTCCATGGTGCTATCACGCATCAAAACTCTTCCTAGGTCTCCACATGGGGTGAATGACATTGCATTTGGTTATCCATCAGATTCACTGATCCTCCCAGAGGTAGAAGATGCTAATGGAATGATTCACAGCTTTACAATCGCAAATCCCCATGATTCTATCACTACAGGAAAACTGAAGGAAAGAAGGGCCAGAGATGGAGTCGATCTCACAAGGAAGCGAAGACAGTTTCCTGCACCATTGTGTGCTCAATATGGACATGATCCATCTGATTGCTCAATAATGGCGACTGACAATATGAGTGGAGATGCATTAGGGTACTTGTAA 2277 0.4264 MSEGTSLVLESSENGTDLSQEDIDTIEETAEETILSRQTSVNLVPFIGQRFVSQEAAYEFYCSFAKQCGFSIRRHRTRGKDGVGRGVTRRDFTCHRGGYPQIKPSDDGKVQRNRKSSRCGCQAYMRIVKRADFDVPEWRVTGFRNTHNHELLKSNEVRLLPAYCPISPDDKSRICMFAKAGMSVRQMLRLMELEKGVKLGCLPFTEIDVRNLLQSFRIVDRDNDAIDLIAMCKRLKDENHNFKYEFKIDSNNRLEHIAWSYSSSIQSYEAFGDAVVFDTTYRVDAYDMLLGCWLGVDNHGMPCFFSCALLRDENIQSFSWALKAFLGFMKGKAPQTILTDHNTWLKEAIAVELPETKHAFCIWHILSKFSDWFSLLLESQYDEWKAEFHRLYNLELVEDFEEGWRQMVDKYGLHTNKHIISLYSLRTFWALPFLRRYFFAGLTSTSQSESINAFIQRFLSAQSQLDRFVEQVADIVDFNDRAGAKQKMQRKLQKACLKTGSPIESHAATVLTPYALNKLQEELVLAPQYASFLVDEGCFQVRHHSQTDGGCKVFWVPCQEHISCSCHLFEFSGILCRHVLRVMSTNNCFHVPDQYLPGRWRGTGSSSVNHFRGTTSRDQPERMQLLESMVSTFFVESIETEERLDVACEQISMVLSRIKTLPRSPHGVNDIAFGYPSDSLILPEVEDANGMIHSFTIANPHDSITTGKLKERRARDGVDLTRKRRQFPAPLCAQYGHDPSDCSIMATDNMSGDALGYL 758
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun9g00116 758 MobiDBLite consensus disorder prediction 1 21 - -
Viun9g00116 758 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 39 605 IPR031052 GO:0006355
Viun9g00116 758 SMART 26again6 562 589 IPR006564 GO:0008270
Viun9g00116 758 Pfam MULE transposase domain 275 367 IPR018289 -
Viun9g00116 758 Pfam FAR1 DNA-binding domain 59 152 IPR004330 -
Viun9g00116 758 ProSiteProfiles Zinc finger SWIM-type profile. 554 587 IPR007527 GO:0008270
Viun9g00116 758 MobiDBLite consensus disorder prediction 1 19 - -
Viun9g00116 758 Pfam SWIM zinc finger 559 584 IPR007527 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun9g00116 Viun-Chr9 714849 721019 Dispersed/Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Viun9g00116 MULE 1.3e-20 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun9g00116 - - vum:124836934 1513.05