Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun9g00111 ATGTCCATGCATGTCCACGTCTTCGTCTTCTTAACGCTTGCCATCTTTTCGGCAACGCCGTCGATGTCACAGTCGCAAACCGCAGCTTCCTGCAATGGAATATTCGTCTCGTACGTCTACACCGGCGGCGAGCGGCTGCCGCCGAACGTTTCCGACGCGACGCAGCAGCCGTACCGGTTCGAGTCGAGGCTGACAGTGCTGAACAACGGTTTGCAGGAGCTGAAGTCTTGGAAGGTGTTCGTGGGGTTTCAGCACAGCGAGTGGTTAGTGTCCGCGTCCAACGCGGTGCTCGCGGACGGTACGAGTCTTCCCGGTGCGGTTGGGAACGGCACCGTGTTAAGTGGGTCGACGGTGAGGGATCTGAAGACGGCGGTGGCGACCGCCGGCGACTTGACCCAGATGCAGGTTCAGGTGGATATGGTGGGGAGCTTGCTTGGGGTTGCGCCACCTTCTGTGCCGATGCCTCGGTCGGTTAATTTGACTAACGATGGATTCGTGTGTGGTCAACCCTTTGGAGAAGGGAGCAATGAAACTCATGTGTGTTGCACAAGTGATCCCAGTTCCAGAACAAACACGAGCACAGAGGAAGAGTTTCTACCCCGCGAGAAGGGTGATCTTAGCATCACATACGACATCATCAGAACCTACGATTCCAATTACTGGGCAGAGGTTACAATCGCAAATAACAACCCTTTAGGTCGTCTTGACAACTGGAGACTAAGCTGGGACTGGCAGAACGACGAGTTCATCTACACGACAAAGGGTGCATATCCATTGAAAGTGGATTCCTCTGACTGTGTTTTCGGTTCTCAAGGTAATTTCTACAAGGAACTTGATTTTTCCAACGTCTTGAACTGTGAAAGAAGGCCAACCATAGTGGATCTTCCTCCCTCAAGGTTCAACGATTCAGAACTGGGTCATATCCCATTCTGCTGCAGGAATGGCACCATCTTGCCACCGACAATGGACCCTAGCATGTCCGCTTCAAGGTTCCAAATGCAAGTCTTCAAAATGCCACCAAACCTTAACCGCTCCACGCTCGCACCTCCTCATAACTGGGAGATAAAGGGTACCCTTAACCCTCACTACGAATGTGGCAACCCTATCAGGGTTAGTCCAACTCAATCCCCTGACCCCACTCACTCTCCATCAAACAAATCATCAATCGCAACTTGGCAAGTGGTCTGCAACATCACAAACACAAACCGTGAAACACGCAAGTGCTGCGTGTCTTTCTCAGCTTATTACAACGAATCGGTTGTCCCATGCAACACGTGTGCATGTGGATGTCCAAGTAATCCGGAGAGAACATGCAGCGCAACTTCACAAGCCATGTTGCTTCCACCGGAGGCACTTCTTGTCCCTTTCGAGAACCGAACTCAGAAGGCCGTTTCTTGGGCTGAGATTAAACATTTACCTGTGCCTAATCCCATGCCTTGCGGTGATAACTGTGGTGTGAGCATAAACTGGCACGTGGCCACGGATTACCGCAAAGGTTGGACCGCGAGGGTGACACTTTTCAACTGGGGTGAGACTAGTTTTGCAGACTGGTTTGCTGCAGTGGAAATGGACAAAGCTGCGAAGGGGTTTGAGGAAGTGTACTCGTTCAATGGAAGCCTTTTGAAGAGTGTGGAGAACACGATCTTCGTGCAAGGGAAAGAGGGGTTGAACTTTCTTGTGGCGGAAACCGATGGATCTAACCCTCGGAAAGATCCTAGGGTGCCGGGGAAACAGCAATCGGTGATCTCGTTTACGAAGAAGGAGACCCCTGGAATCAATGTGGCTGGTGGTGATGGGTTTCCCAGTAAAGTGTTCTTCAATGGGGAAGAATGCTCTCTTCCTTCGGTGTTACCGAGCAGTGTTGCGAGAACAGAGGTTTCATTGCCTACTATGATGTTCTTCCTGATTTTGTTGTCGATATTCTTCATGTCGTAA 1935 0.5106 MSMHVHVFVFLTLAIFSATPSMSQSQTAASCNGIFVSYVYTGGERLPPNVSDATQQPYRFESRLTVLNNGLQELKSWKVFVGFQHSEWLVSASNAVLADGTSLPGAVGNGTVLSGSTVRDLKTAVATAGDLTQMQVQVDMVGSLLGVAPPSVPMPRSVNLTNDGFVCGQPFGEGSNETHVCCTSDPSSRTNTSTEEEFLPREKGDLSITYDIIRTYDSNYWAEVTIANNNPLGRLDNWRLSWDWQNDEFIYTTKGAYPLKVDSSDCVFGSQGNFYKELDFSNVLNCERRPTIVDLPPSRFNDSELGHIPFCCRNGTILPPTMDPSMSASRFQMQVFKMPPNLNRSTLAPPHNWEIKGTLNPHYECGNPIRVSPTQSPDPTHSPSNKSSIATWQVVCNITNTNRETRKCCVSFSAYYNESVVPCNTCACGCPSNPERTCSATSQAMLLPPEALLVPFENRTQKAVSWAEIKHLPVPNPMPCGDNCGVSINWHVATDYRKGWTARVTLFNWGETSFADWFAAVEMDKAAKGFEEVYSFNGSLLKSVENTIFVQGKEGLNFLVAETDGSNPRKDPRVPGKQQSVISFTKKETPGINVAGGDGFPSKVFFNGEECSLPSVLPSSVARTEVSLPTMMFFLILLSIFFMS 644
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun9g00111 644 PANTHER COBRA-LIKE PROTEIN 7 22 642 - -
Viun9g00111 644 SUPERFAMILY Carbohydrate-binding domain 202 251 IPR008965 GO:0030246
Viun9g00111 644 Pfam COBRA-like protein 220 399 IPR006918 GO:0010215|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun9g00111 Viun-Chr9 701138 703939 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun9g00111 31 628 COBRA Gene Family AT4G16120 64.179 0.0 824
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun9g00111 - - vum:124836920 1214.13
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun9g00111 9 701138 703939 Viun9g00111 9 701138 703939 ECH
Viun3g05682 3 62428729 62431252 Viun9g00111 9 701138 703939 PCT