Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun9g00107 ATGAGTGGTGCATCAGAAAACCCTATTCATGACAGTACTCAAGGTAAGGCTTCTTCTTCTTCATCAACAACGTTGAAACTCTTTGGTTTTCCGTTAACTTCATCGGAAAACCCCATCAACAAAGAGATTCACGTGGTGGCGGCGGCGGCAGCGAGAACCGCCGTTTCTCCTCCTCCTCCTCCTCATTGCCCTTACAAGAGATTCAAGTGCCACTTCTGCTACCGTGAATTCGCCAATTCACAAGCTCTCGGTGGCCACCAGAACGCTCACAAGAGAGAACGCCAGAAAGCTGCTCTCTCACCCTTCGGTTACTTTCGCTACCATCAACGCCTCACGGCACCGCCGGCTCACTCTCCGATCGTGGTTCCGCACGGTGGATCAAGACCGTTGGTTGGTCCACGTGACAGGGCTCAGCGACCATGGCTCTCGTGGGACACTGATCATGATGATGATGATCGTAGGGTTGGGTTAGTGAGGCCAATGGGTGCAGGTGCAGTTAGCATTGACAGAGTGAGGGAAGTACACAATATTATTAATGATGGTGATGATGGTAATGGTGGTGTTGATCTTAACTTGAGTTTGGCTAACAAAGCTTTCAATTTTAGGGACAAGGAATTTGGCAGGTGTAAGAGAAGCTGA 639 0.4977 MSGASENPIHDSTQGKASSSSSTTLKLFGFPLTSSENPINKEIHVVAAAAARTAVSPPPPPHCPYKRFKCHFCYREFANSQALGGHQNAHKRERQKAALSPFGYFRYHQRLTAPPAHSPIVVPHGGSRPLVGPRDRAQRPWLSWDTDHDDDDRRVGLVRPMGAGAVSIDRVREVHNIINDGDDGNGGVDLNLSLANKAFNFRDKEFGRCKRS 212
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun9g00107 212 MobiDBLite consensus disorder prediction 116 135 - -
Viun9g00107 212 SUPERFAMILY beta-beta-alpha zinc fingers 66 95 IPR036236 -
Viun9g00107 212 Gene3D Classic Zinc Finger 52 102 - -
Viun9g00107 212 MobiDBLite consensus disorder prediction 1 22 - -
Viun9g00107 212 PANTHER ZINC FINGER PROTEIN 5 12 196 IPR044299 GO:0010090
Viun9g00107 212 ProSitePatterns Zinc finger C2H2 type domain signature. 70 90 IPR013087 -
Viun9g00107 212 ProSiteProfiles Zinc finger C2H2 type domain profile. 68 95 IPR013087 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun9g00107 Viun-Chr9 653590 654228 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun9g00107 66 108 C2H2 Transcription Factor Family AT3G58070 65.116 3.86e-12 62.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun9g00107 - - vun:114162545 398.282