Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun9g00106 ATGGGATTTGAAAGAGAAGGGACGAAAAGTGGAGGTTATGTTGGTGGTTTTTTCCAGTTGTTTGACTGGACGTCGAAGTCCCGTAAGAAATTATTTGCGGCCAAGTCAGATTTGCCAGAGACTTTAAAACAGGGAAGAAGAGTCGGTTACAATGTGGCAATGCCAATGACACAGTCCTCCTATCTGGTTGATGAAGATGAAAATGGAGTTGGGGCGAGTCTAAGAGGAAGTTGTGATCATAGTTATGCTTCATCTGTTACAGATGATGAAGCATTTGGTACAAGGGCTCCTAGTGTTGTTGCCAGGCTTATGGGATTAGATTCTTTGCCTTCTTCAAGTTTTTCTGATCCTTATGCTACCCCATATTTTGATACCCGGTCCCTTCAAGATGCCCAGTACTTCAAGAAAAACTTTGGTCACCAGCATGACCATCAGACCCCATATTCTGGCAAGCTGGTTGAAAAGGTTGAGGGCTCATCTAGGAGCTTCATTGAGCCAAAGCCACAAAAGGCCATTACCAGGCCAATTGAAAAGTTCCAAACAGAAGTGTTGCCTCCAAAATCAGCTAAATCAATTCCTGTTACACACCATAAACTTTTGTCCCCCATTAAGAGTCCCAGCTTTGTTCCCACCAATAATGCTGCATATATAATGGAGGCTGCGGCAAGAATTATTGAGCCTGGTTCCCAAGCTAGTACCAGGGCTAAGACACCTCTGGTAGCATCATCAGCACCACTGAGAGTGAGAGAACTAAAAGATAAGGTGGAGGCTTCACAAAAGGGACCTCTAATTGGGCCATCCTCCATGACCTCTAGAGCTCGAGATCTAAAAGAGAAAAGAGAACTTTCTCAAAGAACGGCCAGGCTTTCCGTATCTTGTCAAAGATCGGTCGAGTCAAATGCTGCCAAGTATCTCAAAGGGCAATCTTTGAACAGAAGCTGGAATGGATCTGAGGATATATCCATCAAATCTCCTACACATGAGGAAGAAGTTTCTTCTTTGAAGAATAATAAGGGGAAGTCCATTTCGCTTGCAATCCAAGCAAAAGTGAATGTTCAAAGAAGGGAAGGTTTGAGTATGACTGGTGGAAGGAGTATGACGACCCAAAAGGAGAATCCTGACTTGAAATCCAACCAACCAATGAAGACAAACGTGCAGAAAAATTTGCACAAGAAATCTTCTACTCAGAATTCATCTGGTGCTCTCAGACAGAATAATCTGAAACAGAATTATTCTACTGACAAAGACAAATTACCATCAAAGCCATTGACTACCAATTCCCACAGTAGAAAAGTTCTGACTGGGGATTCCCCTTACGGACGTCATAGAAGCTCCAGTAATAAATCCATTGCAAAATCTAAAGTTGGATCCAGAAAGTCAGCTATGGAGGTGACTGATAGTGAAAAGGAAGTTTTATACACCAGCACAAACAATTTTCCTAGAAAGAAAAGGTCTACAGACAAGGACTGGAATGATAGGGTTGTGGACAATTTGTTCATTGAAAAAACTCAAAAGCCTGCTAAGTCTAACCTAGTGAGTAATAAACAAAATAGTTGGGCTGAAGATGTAAAAAAGAAAGACATGGATGTAGTTTCATTCACATTCACCACACCATTAACAAGGAGCAATCCCGGTTTTGAGACATCTGGACAAGCTGCCCAAACTACTAATAATGGTCTTTCCCTGGATCAACGCATAAAAAGGGTGTTGCTTGACCCAGACAATACAAGGTCCCCAATAGGATACAATTTGATTGGTGGTGGTGATGCCTTGGGTGTCCTTTTGGAACAGAAATTGAGAGAATTAACATGTATGGAAACAACTTGTCATGACTCTTCTAAAATGAGACAACCTGCCATTACTCCTACTGTATCAGATGATCAAGTAACCGGCTTGAATGTAGTTAACCTCAATCCAAGGTTGCAACAGAAAAAAGACCAAGATGTGTTATTTACAGACAAATTAAGAAACAACTATGATTCAGACATCTCCTTCAGGGGTCTTCCTGAATTATCATTGAAGCAGAACTCATGGATTGATGAGATGGAGCCACAGTTACTCAATTGCAGACACCCAAGTCCAATCTCTGTTCTCGAGCCTTCTTTTTCAATTGAAAGCTGTGAATCTTCATTGAGCACAGATGTTACTAGTACAGAAGGAAGCAAGTTGTGGTCATCTTTTCAAGCTCAGGAAGTTCAAGGCTTGAATTTTTCAAGGAAGTTCTATGCTTGTGAAACTGATGCTGAGTTATCCGATTCAGCTTCTTCAACCTCAGCTGGGAACATGATGAAGCACACAAGTACCGTCACAAGGTTTGGTAGCAGCTCAAGCACGTGGGAGTTGGATTATGTGAAAGATATATTGAGTACTGTTGAGTTGATGTATATAGATTTTTCCCTTGGCCAAGCTAGTGAGGTTATAAACCCTCATCTATTCAAACAGTTGGAAGGTCGGAAGGGAGGGTTTAAGCATGATGAGGAGGCTAGGATGAGAAGGAAAGTTACATTTGATTGTGTAAGTGAATGTTTGGACTTGAGATGCAGGCGTTATGTGGGTGGAGGATTCAAAATGTGGACCAAAGGGCTTGAAATGGTTAAAAGAAAAGAATGGTTAGCAGAAGATGTGTACAAGGATATCTCATGTTGGAGAGGAATGGGAGACTCAATGGTGGATGAGCTTGTGGGCAAGGACATGAGCAGCCAGTTTGGAAGATGGCTAGATTATGAGGTTGATGCTTCTGAACTCGGATCAGAGGTTGTGGACCAAATATTTAATTCTTTGGTTGATGGTGTTGTCACTGAAATCTTGCAATTGTAA 2817 0.4164 MGFEREGTKSGGYVGGFFQLFDWTSKSRKKLFAAKSDLPETLKQGRRVGYNVAMPMTQSSYLVDEDENGVGASLRGSCDHSYASSVTDDEAFGTRAPSVVARLMGLDSLPSSSFSDPYATPYFDTRSLQDAQYFKKNFGHQHDHQTPYSGKLVEKVEGSSRSFIEPKPQKAITRPIEKFQTEVLPPKSAKSIPVTHHKLLSPIKSPSFVPTNNAAYIMEAAARIIEPGSQASTRAKTPLVASSAPLRVRELKDKVEASQKGPLIGPSSMTSRARDLKEKRELSQRTARLSVSCQRSVESNAAKYLKGQSLNRSWNGSEDISIKSPTHEEEVSSLKNNKGKSISLAIQAKVNVQRREGLSMTGGRSMTTQKENPDLKSNQPMKTNVQKNLHKKSSTQNSSGALRQNNLKQNYSTDKDKLPSKPLTTNSHSRKVLTGDSPYGRHRSSSNKSIAKSKVGSRKSAMEVTDSEKEVLYTSTNNFPRKKRSTDKDWNDRVVDNLFIEKTQKPAKSNLVSNKQNSWAEDVKKKDMDVVSFTFTTPLTRSNPGFETSGQAAQTTNNGLSLDQRIKRVLLDPDNTRSPIGYNLIGGGDALGVLLEQKLRELTCMETTCHDSSKMRQPAITPTVSDDQVTGLNVVNLNPRLQQKKDQDVLFTDKLRNNYDSDISFRGLPELSLKQNSWIDEMEPQLLNCRHPSPISVLEPSFSIESCESSLSTDVTSTEGSKLWSSFQAQEVQGLNFSRKFYACETDAELSDSASSTSAGNMMKHTSTVTRFGSSSSTWELDYVKDILSTVELMYIDFSLGQASEVINPHLFKQLEGRKGGFKHDEEARMRRKVTFDCVSECLDLRCRRYVGGGFKMWTKGLEMVKRKEWLAEDVYKDISCWRGMGDSMVDELVGKDMSSQFGRWLDYEVDASELGSEVVDQIFNSLVDGVVTEILQL 938
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun9g00106 938 MobiDBLite consensus disorder prediction 355 467 - -
Viun9g00106 938 Pfam DUF761-associated sequence motif 84 115 IPR032795 -
Viun9g00106 938 MobiDBLite consensus disorder prediction 254 273 - -
Viun9g00106 938 Pfam Domain of unknown function (DUF4378) 780 929 IPR025486 -
Viun9g00106 938 MobiDBLite consensus disorder prediction 358 454 - -
Viun9g00106 938 PANTHER PHOSPHATIDYLINOSITOL N-ACETYLGLUCOSAMINYLTRANSFERASE SUBUNIT P DOWN SYNDROME CRITICAL REGION PROTEIN 5 -RELATED 6 934 - -
Viun9g00106 938 MobiDBLite consensus disorder prediction 313 337 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun9g00106 Viun-Chr9 641270 646471 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun9g00106 15 936 TRM (TON1 Recruiting Motif) Superfamily AT3G58650 30.021 2.34e-86 293
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun9g00106 - - gmx:102669513 1553.5
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun9g00106 9 641270 646471 Viun9g00106 9 641270 646471 ECH
Viun3g05677 3 62381938 62386870 Viun9g00106 9 641270 646471 PCT