Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun9g00075 ATGAGTGTTAAGGTAGCAAAAGGTGGTGGTGTCGTGGTTGGGAAATACGAGTTGGGAAAAACCATCGGAGAAGGAAGCTTTGCGAAGGTGAAGTTCGCCAGACACGTCAACAACGGTAACAAGGTTGCCATCAAAATCCTCGACCGCAAACATGTCCTCCGCCACAACATGATGGAACAGCTCCAGCGAGAAATATCTTCCATGAGACTCATCAATCACCCAAATGTTACTAAAATATTTGAGGTGATGGCAAGCAAAACAAAGATTTACATTGTTCTGGAGTTAGTTGATGGGGGAGAGCTATTTGACAAAATAGCTGCAAAGGGGAAACTTGAAGAAGATGAAGCTAGAAATTATTTCCAACAACTTATTAATGCTGTTGACTACTGCCATAGTAGAGGCGTGTATCACAGAGATTTGAAGCCTGAGAATCTTCTTCTGGACTCGAACAGTGTTCTTAAAGTTTCAGATTTTGGATTGAGTACGTACACGCAGAAAGAGGATGAACTTCTCCGCACTGCATGTGGAACACCAAATTATGTTGCTCCTGAGGTGATTCATAATAAAGGCTATGTTGGTTCTACATCTGATATGTGGTCTTGCGGAGTTATTCTCTTTGTACTTATGGCTGGGTTCATGCCTTTTGATGCACCAACTCCCATGGCTCTGTTCAAGAAAATTGTCAAGGCAGAATTCTCTTGTCCATCATGGTTTCCACCACAGGCAAAGACACTGTTGAAACGCATTCTAGACCCCAACCCTCAAACGAGGATAAAAATTCCTGAGCTCTTGAAAGACGAGTGGTTCAAGAAAGGATACAAACCCACTTCTTTTACTGAAGAGGACCTAAGCGTAGATGATGTAGCTTTCGCCTTCAACGACTCTAATAAAAATCTAGTGACAGGAAAAAAAGTGAAACCCGTCTACATCAACGCTTTTGAGCTCATTTCTAGGTCACAAAGTTTCAATCTTGAGAATTTGTTCGAGATGCAAACGGATGAAGTGAAGCAAGAAACCTGTTTTACTTCACAGTGCCCTGCAATTGAAATTATGCACAAAATTGAAGAAGCAGCGAAGCCCCTGGGATTTATTGTACAAAAGAAAAATTATAAGATGAAGCTGCAAGGTGACCAGAACGGAAGGAAGGGTCACCTTTCGGTGGCCACTGAGGTTTTTGAAGTGGCTCCCTCAGTGCACATGGTGGAGCTGCGAAAGACAGGGGGTGATACACTTGAGTTTCATAAGTTCTACAAAATCTTCTCATCAGGGTTGCAAGACATTGTGTGGCATACAGAAGAAAAGAAGTGA 1308 0.4243 MSVKVAKGGGVVVGKYELGKTIGEGSFAKVKFARHVNNGNKVAIKILDRKHVLRHNMMEQLQREISSMRLINHPNVTKIFEVMASKTKIYIVLELVDGGELFDKIAAKGKLEEDEARNYFQQLINAVDYCHSRGVYHRDLKPENLLLDSNSVLKVSDFGLSTYTQKEDELLRTACGTPNYVAPEVIHNKGYVGSTSDMWSCGVILFVLMAGFMPFDAPTPMALFKKIVKAEFSCPSWFPPQAKTLLKRILDPNPQTRIKIPELLKDEWFKKGYKPTSFTEEDLSVDDVAFAFNDSNKNLVTGKKVKPVYINAFELISRSQSFNLENLFEMQTDEVKQETCFTSQCPAIEIMHKIEEAAKPLGFIVQKKNYKMKLQGDQNGRKGHLSVATEVFEVAPSVHMVELRKTGGDTLEFHKFYKIFSSGLQDIVWHTEEKK 435
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun9g00075 435 PANTHER CALCIUM/CALMODULIN-DEPENDENT PROTEIN KINASE KINASE-RELATED 13 415 - -
Viun9g00075 435 Gene3D Transferase(Phosphotransferase) domain 1 96 291 - -
Viun9g00075 435 SMART serkin_6 16 269 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun9g00075 435 Pfam Protein kinase domain 16 269 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun9g00075 435 FunFam Non-specific serine/threonine protein kinase 10 307 - -
Viun9g00075 435 ProSitePatterns Serine/Threonine protein kinases active-site signature. 135 147 IPR008271 GO:0004672|GO:0006468
Viun9g00075 435 ProSiteProfiles Protein kinase domain profile. 16 269 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun9g00075 435 CDD CIPK_C 311 418 - -
Viun9g00075 435 FunFam Non-specific serine/threonine protein kinase 304 430 - -
Viun9g00075 435 Gene3D Kinase associated domain 1, KA1 305 430 - -
Viun9g00075 435 Gene3D Phosphorylase Kinase; domain 1 6 95 - -
Viun9g00075 435 SUPERFAMILY Protein kinase-like (PK-like) 12 280 IPR011009 -
Viun9g00075 435 ProSitePatterns Protein kinases ATP-binding region signature. 22 45 IPR017441 GO:0005524
Viun9g00075 435 FunFam Non-specific serine/threonine protein kinase 8 95 - -
Viun9g00075 435 ProSiteProfiles NAF domain profile. 305 329 IPR018451 GO:0007165
Viun9g00075 435 Pfam NAF domain 307 367 IPR004041 GO:0007165
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun9g00075 Viun-Chr9 441380 445602 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun9g00075 13 432 CBL-interacting serine-threonine protein kinases AT1G01140 70.327 0.0 627
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-CHK1 Viun9g00075 Pkinase 4.3e-73 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun9g00075 - - gmx:100777218 721.85