Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun9g00073 ATGAGTGTTAAGGTAGCAAAAGGTGGTGGTGTCGTGGTTGGGAAATACGAGTTGGGAAAAACCATCGGAGAAGGAAGCTTTGCGAAGGTGAAGTTCGCCAGACACGTCAACAACGGTAACAAGGTTGCCATCAAAATCCTCGACCGCAAACATGTCCTCCGCCACAACATGATGGAACAGCTCCAGCGAGAAATATCTTCCATGAGACTCATCAATCACCCAAATGTTACTAAAATATTTGAGGTGATGGCAAGCAAAACAAAGATTTACATTGTTCTGGAGTTAGTTGATGGGGGAGAGCTATTTGACAAAATAGCTGCAAAGGGGAAACTTGAAGAAGATGAAGCTAGAAATTATTTCCAACAACTTATTAATGCTGTTGACTACTGCCATAGTAGAGGCGTGTATCACAGAGATTTGAAGCCTGAGAATCTTCTTCTGGACTCGAACAGTGTTCTTAAAGTTTCAGATTTTGGATTGAGTACGTACACGCAGAAAGAGGATGAACTTCTCCGCACTGCATGTGGAACACCAAATTATGTTGCTCCTGAGGTGATTCATAATAAAGGCTATGTTGGTTCTACATCTGATATGTGGTCTTGCGGAGTTATTCTCTTTGTACTTATGGCTGGGTTCATGCCTTTTGATGCACCAACTCCCATGGCTCTGTTCAAGAAAATTGTCAAGGCAGAATTCTCTTGTCCATCATGGTTTCCACCACAGGCAAAGACACTGTTGAAACGCATTCTAGACCCCAACCCTCAAACGAGGATAAAAATTCCTGAGCTCTTGAAAGACGAGTGGTTCAAGAAAGGATACAAACCCACTTCTTTTACTGAAGAGGACCTAAGCGTAGATGATGTAGCTTTCGCCTTCAACGACTCTAATAAAAATCTAGTGACAGGAAAAAAAGTGAAACCCGTCTACATCAACGCTTTTGAGCTCATTTCTAGGTCACAAAGTTTCAATCTTGAGAATTTGTTCGAGATGCAAACGTGCCCTGCAATTGAAATTATGCACAAAATTGAAGAAGCAGCGAAGCCCCTGGGATTTATTGTACAAAAGAAAAATTATAAGATGAAGCTGCAAGGTGACCAGAACGGAAGGAAGGGTCACCTTTCGGTGGCCACTGAGGTTTTTGAAGTGGCTCCCTCAGTGCACATGGTGGAGCTGCGAAAGACAGGGGGTGATACACTTGAGTTTCATAAGTTCTACAAAATCTTCTCATCAGGGTTGCAAGACATTGTGTGGCATACAGAAGAAAAGAAGTGA 1272 0.4253 MSVKVAKGGGVVVGKYELGKTIGEGSFAKVKFARHVNNGNKVAIKILDRKHVLRHNMMEQLQREISSMRLINHPNVTKIFEVMASKTKIYIVLELVDGGELFDKIAAKGKLEEDEARNYFQQLINAVDYCHSRGVYHRDLKPENLLLDSNSVLKVSDFGLSTYTQKEDELLRTACGTPNYVAPEVIHNKGYVGSTSDMWSCGVILFVLMAGFMPFDAPTPMALFKKIVKAEFSCPSWFPPQAKTLLKRILDPNPQTRIKIPELLKDEWFKKGYKPTSFTEEDLSVDDVAFAFNDSNKNLVTGKKVKPVYINAFELISRSQSFNLENLFEMQTCPAIEIMHKIEEAAKPLGFIVQKKNYKMKLQGDQNGRKGHLSVATEVFEVAPSVHMVELRKTGGDTLEFHKFYKIFSSGLQDIVWHTEEKK 423
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun9g00073 423 Gene3D Transferase(Phosphotransferase) domain 1 96 291 - -
Viun9g00073 423 FunFam Non-specific serine/threonine protein kinase 304 418 - -
Viun9g00073 423 FunFam Non-specific serine/threonine protein kinase 10 307 - -
Viun9g00073 423 SMART serkin_6 16 269 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun9g00073 423 Pfam NAF domain 307 355 IPR004041 GO:0007165
Viun9g00073 423 ProSitePatterns Serine/Threonine protein kinases active-site signature. 135 147 IPR008271 GO:0004672|GO:0006468
Viun9g00073 423 ProSiteProfiles Protein kinase domain profile. 16 269 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun9g00073 423 SUPERFAMILY Protein kinase-like (PK-like) 12 280 IPR011009 -
Viun9g00073 423 Pfam Protein kinase domain 16 269 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun9g00073 423 Gene3D Phosphorylase Kinase; domain 1 6 95 - -
Viun9g00073 423 ProSitePatterns Protein kinases ATP-binding region signature. 22 45 IPR017441 GO:0005524
Viun9g00073 423 CDD CIPK_C 311 406 - -
Viun9g00073 423 Gene3D Kinase associated domain 1, KA1 305 418 - -
Viun9g00073 423 FunFam Non-specific serine/threonine protein kinase 8 95 - -
Viun9g00073 423 ProSiteProfiles NAF domain profile. 305 329 IPR018451 GO:0007165
Viun9g00073 423 PANTHER CALCIUM/CALMODULIN-DEPENDENT PROTEIN KINASE KINASE-RELATED 13 403 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun9g00073 Viun-Chr9 441380 445602 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun9g00073 13 420 CBL-interacting serine-threonine protein kinases AT1G01140 68.458 0.0 605
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-CHK1 Viun9g00073 Pkinase 4e-73 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun9g00073 - - gmx:100777218 696.041