Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun9g00056 ATGGCAAACCTTCCAAATTCAAAGCTGAACGGCGAAGAGAAGAAGGAAAAAGAAGAAAGAGAAGATGAAGAAAGCTTCTCGCGTGCCATGCAGCTTGTGGGCTCCGTGGTGCTACCGATGGCACTGCAATCGGCGACGGAGCTGGGTGTGTTTGAGGTGCTGAAAGAAGCTGGTGAAGGTGCTAAGCTGTCTGCAAAGGACATAGCATCCAAGATTTCCTGCACCAACCCACAAGCAGCCTCAATGCTAGATCGTATCCTCACTCTTCTTTCCTCTCACTCCATTCTTCACTCTTCCCTCGTTTCCGACCACCGTCTCCCTCCCACCTTTCACCGCCTCTACACCATCACTCCCGTCGCCACATTCTTCGCTCGCAATTCCGATGGGGTTTCACTGGGACCCTGGATGGCCTTGATCCATGACAAAATCTTCCTTCACAGCTGGAGTGAGCTGAAAGATGCAATTCGGGAAGGGGGTGTTCCATTCAACAGGGTTTATGGCACTCATGCTTTTGAGTATCCAAAGTTGGACTCAAGGTTCAATGAAGTTTTCAACACAGCAATGATCAATCACACCACTTTGGTGATGAAGAAGATTCTGGAATCCTACAATGGTTTGGAGGGCATAAAAAGGTTGGTGGATGTTGGTGGTGGACTTGGGATCAACATTAGCTTCATCACTTCAAAATACCCTCATATCCATGGCATCAATTTCGACTTGCCTCACGTCATTCAACATGCTCCTTCCTATCCCGGAGTGGATCACGTTTGTGGAGATATGTTTGAAAATGTGCCTAAAGGAGACGCTATTTTCATGAAGTGGATACTTCATGATTGGAGCGATGAAGAGTGTGTGAAGGTGTTGAAGAATTTCTACGATGCGATTCCTGATGATGGAAAGGTGATAGTCGTGGAAGCTGTTGTTCCAAAAATGGCAGAGAGTAATGACGCTTATAAGGCAGTTTCACAAATGGATGTTGTGATGATGACTCAACACGTGGGAGGGAAAGAGCGATGTGAACAAGAGTTCATGGATTTGGCAACTGAAGCTGGATTCAGTGGCATCAGACATGAATGTCGTGTCAACATTTACTGGGTTATGGAGTTCTTCAAGTAA 1116 0.4651 MANLPNSKLNGEEKKEKEEREDEESFSRAMQLVGSVVLPMALQSATELGVFEVLKEAGEGAKLSAKDIASKISCTNPQAASMLDRILTLLSSHSILHSSLVSDHRLPPTFHRLYTITPVATFFARNSDGVSLGPWMALIHDKIFLHSWSELKDAIREGGVPFNRVYGTHAFEYPKLDSRFNEVFNTAMINHTTLVMKKILESYNGLEGIKRLVDVGGGLGINISFITSKYPHIHGINFDLPHVIQHAPSYPGVDHVCGDMFENVPKGDAIFMKWILHDWSDEECVKVLKNFYDAIPDDGKVIVVEAVVPKMAESNDAYKAVSQMDVVMMTQHVGGKERCEQEFMDLATEAGFSGIRHECRVNIYWVMEFFK 371
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun9g00056 371 Gene3D - 6 123 IPR036388 -
Viun9g00056 371 FunFam Caffeic acid O-methyltransferase 124 371 - -
Viun9g00056 371 CDD AdoMet_MTases 211 304 - -
Viun9g00056 371 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 128 369 IPR029063 -
Viun9g00056 371 PIRSF O-mtase 7 371 IPR016461 GO:0008168
Viun9g00056 371 Pfam Dimerisation domain 40 90 IPR012967 GO:0046983
Viun9g00056 371 PANTHER O-METHYLTRANSFERASE 29 356 IPR016461 GO:0008168
Viun9g00056 371 Gene3D Vaccinia Virus protein VP39 124 371 IPR029063 -
Viun9g00056 371 MobiDBLite consensus disorder prediction 1 26 - -
Viun9g00056 371 FunFam Caffeic acid 3-O-methyltransferase 7 123 - -
Viun9g00056 371 SUPERFAMILY "Winged helix" DNA-binding domain 20 126 IPR036390 -
Viun9g00056 371 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 30 371 IPR016461 GO:0008168
Viun9g00056 371 MobiDBLite consensus disorder prediction 9 26 - -
Viun9g00056 371 Pfam O-methyltransferase domain 148 353 IPR001077 GO:0008171
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun9g00056 Viun-Chr9 329011 331088 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun9g00056 22 371 Monolignol Biosynthesis Gene Families AT5G54160 50.997 1.19e-127 369
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun9g00056 K13066 - gmx:100803633 564.303