Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun9g00032 ATGGTGGAGTTTAGAAGGTTGTTACTGTTGCTGTGCATCACTTCCTGCATTCTTTGTTGGATGCCCAATGGTGCTACTTCTGCTACAGATCCAAATGATGCTGCTGCTTTGAGATTTTTATTTCAAAATTTGAACTCACCAGCCCAGCTTGGTTGGCCTGCTAATGGTGATGATCCATGTGGACAACCTTGGAAAGGAATTTCTTGCTCAGGCAACCGTGTTACAGAGATTAAGTTGTCTAATCTTGGACTAACTGGGTCGTTGCCTTATGGATTACAAGTCTTGACATCTTTGAGCGCCCTAGACATGAGTAGCAACAGTCTTGGCGGCAGCATACCATATCAACTCCCTCCATATGTGCAGCGATTAAATCTTGCTCATAATAACATCACAGGGACTGTTCCTTACTCTATTTCAAACCTGACCGCTCTTACAGACCTGAATCTTGGTCACAATCAGCTCCAGCAAGGACTGGCTGTTAACTTTCTTAATCTTTCCACCCTCTCCACATTGGATCTCTCTTTCAATTCTCTAACCGGTGACCTCCCTCAGACTATGAGCTCACTTTCACGCATAACAACCATGAATCTGCAAAACAATCAGTTTACGGGCACTATTGATGTCCTTGCTAATCTTCCTCTGGATAATCTGAATGTGGAAAACAATAATTTCACTGGATGGATACCGGAACAGTTGAAGAACATAAACCTACAGAGCGGTGGTAATGGATGGAGCTCCGGATCTGCACCCCCACCTCCTCCTGGTACACCTCCCATACCAAAAAGGAACAAACACCACCAGTCTGGAGGGGGAAGCACCACCCCAGATGTCGGCGGCAGCAGCAGCAGCTCAGTTGATGGGGGCAAAAAGTCCAGTATAGGAGGTGGTGCCATAGCTGGAATTGTAGTCTCCGTCATAGTTGTTGGGGCAATAGTAGTGTTCTTTCTGGCGAAGAGAAAATCCAAGAAGACATCTTCAGATTTAGAAAAGCTGGACAATCAATCCTTTGCTCCACTTCCCTCAAATGGAGTGCATGAAGAGAAGTCTGAGCAAGCATCCTCAGTACCAGACATGAAGACGCTTGATACTTCTGCCTCAATAAATCTTAAACCCCCACCTATTGATCGACATAAATCATTTGATGATGAAGAGTTCTCCAAGAAGCCCACAATTGTGAAGAAGACTGTAACAGCTCCTGCAAATGTGAAATCATATTCTATTGCTGACCTGCAGATTGCTACTGGTAGCTTCAATGTGGATCATCTTGTTGGCGAGGGGTCTTTTGGGCGTGTTTACCGTGCTCAATTTGATGATGGAGAGGTTCTTGCAGTGAAGAAGATAGATTCATCTGTCCTTTCCAGTGATTTGTCAGATGATTTTATAGAAATAATTTCAAACATCTCCAGTTTGCATCATCCAAATGTGACAGAGCTTGTAGGTTATTGCTCAGAGTATGGACAACACCTCTTGGTCTACGAATTTCATAAAAATGGATCACTGCATGACTTCCTTCATCTACCAGACGAATATAGTAAACCACTTATATGGAATTCCCGTGTCAAGATTGCTTTGGGTACTGCACGTGCTTTAGAGTACTTACATGAAGTTAGTTCGCCATCCGTTGTTCATAAGAATATTAAATCAGCCAACATATTACTTGATACAGAGCTTAATCCTCATCTTTCAGATAGTGGATTGGCTAGCTATATTCCAAATGCAGACCAGATATTGAGTCATAATGTTGGATCTGGATATGATGCACCTGAAGTTGCGTTGTCTGGTCAGTATACTCTGCAAAGTGATGTCTACAGCTTTGGGGTTGTCATGTTGGAACTTCTCAGCGGCCGGAAGCCATTTGATAGCTCAAGGCCAAGATCTGAGCAGTCTTTGGTTCGATGGGCAACACCTCAACTCCATGATATTGATGCATTGAGTAAAATGGTTGATCCTACATTGAAGGGGCTATATCCTGTTAAGTCTCTTTCTCGATTTGCGGATGTTATTGCCCTTTGCGTGCAGCCGGAGCCTGAATTCCGACCACCAATGTCAGAAGTGGTTCAAGCACTGGTGCGATTGGTGCAGCGAGCTAACATGAGCAAGCGAACATTTAGCAATAGTGATCATGGAGGATCCCTACGAGGAAGCGATGAGGCAGCTCTACGGGAGATATAA 2172 0.4406 MVEFRRLLLLLCITSCILCWMPNGATSATDPNDAAALRFLFQNLNSPAQLGWPANGDDPCGQPWKGISCSGNRVTEIKLSNLGLTGSLPYGLQVLTSLSALDMSSNSLGGSIPYQLPPYVQRLNLAHNNITGTVPYSISNLTALTDLNLGHNQLQQGLAVNFLNLSTLSTLDLSFNSLTGDLPQTMSSLSRITTMNLQNNQFTGTIDVLANLPLDNLNVENNNFTGWIPEQLKNINLQSGGNGWSSGSAPPPPPGTPPIPKRNKHHQSGGGSTTPDVGGSSSSSVDGGKKSSIGGGAIAGIVVSVIVVGAIVVFFLAKRKSKKTSSDLEKLDNQSFAPLPSNGVHEEKSEQASSVPDMKTLDTSASINLKPPPIDRHKSFDDEEFSKKPTIVKKTVTAPANVKSYSIADLQIATGSFNVDHLVGEGSFGRVYRAQFDDGEVLAVKKIDSSVLSSDLSDDFIEIISNISSLHHPNVTELVGYCSEYGQHLLVYEFHKNGSLHDFLHLPDEYSKPLIWNSRVKIALGTARALEYLHEVSSPSVVHKNIKSANILLDTELNPHLSDSGLASYIPNADQILSHNVGSGYDAPEVALSGQYTLQSDVYSFGVVMLELLSGRKPFDSSRPRSEQSLVRWATPQLHDIDALSKMVDPTLKGLYPVKSLSRFADVIALCVQPEPEFRPPMSEVVQALVRLVQRANMSKRTFSNSDHGGSLRGSDEAALREI 723
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun9g00032 723 SUPERFAMILY L domain-like 28 234 - -
Viun9g00032 723 ProSitePatterns Protein kinases ATP-binding region signature. 423 446 IPR017441 GO:0005524
Viun9g00032 723 MobiDBLite consensus disorder prediction 330 358 - -
Viun9g00032 723 ProSiteProfiles Protein kinase domain profile. 417 692 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun9g00032 723 Pfam Leucine rich repeat N-terminal domain 31 70 IPR013210 -
Viun9g00032 723 Gene3D Ribonuclease Inhibitor 119 185 IPR032675 -
Viun9g00032 723 Gene3D Ribonuclease Inhibitor 33 118 IPR032675 -
Viun9g00032 723 Gene3D Ribonuclease Inhibitor 186 245 IPR032675 -
Viun9g00032 723 MobiDBLite consensus disorder prediction 266 289 - -
Viun9g00032 723 Pfam Protein tyrosine and serine/threonine kinase 419 689 IPR001245 GO:0004672|GO:0006468
Viun9g00032 723 MobiDBLite consensus disorder prediction 326 358 - -
Viun9g00032 723 MobiDBLite consensus disorder prediction 239 289 - -
Viun9g00032 723 FunFam Protein STRUBBELIG-RECEPTOR FAMILY 8 381 494 - -
Viun9g00032 723 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 8 693 IPR046959 -
Viun9g00032 723 MobiDBLite consensus disorder prediction 701 723 - -
Viun9g00032 723 SUPERFAMILY Protein kinase-like (PK-like) 399 689 IPR011009 -
Viun9g00032 723 FunFam protein STRUBBELIG-RECEPTOR FAMILY 8 495 703 - -
Viun9g00032 723 Gene3D Phosphorylase Kinase; domain 1 379 494 - -
Viun9g00032 723 FunFam protein STRUBBELIG-RECEPTOR FAMILY 3 30 255 - -
Viun9g00032 723 Gene3D Transferase(Phosphotransferase) domain 1 496 710 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun9g00032 Viun-Chr9 184942 192190 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun9g00032 13 702 Strubbelig Receptor Gene Family AT1G53730 65.951 0.0 834
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-V Viun9g00032 PK_Tyr_Ser-Thr 2.7e-41 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun9g00032 - - gmx:100807707 1181.78