Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun9g00021 ATGTGGTGGAGATCAGCGTCATTCATCATGGACAGGCAGCAGAACGAGGCTGCTCTCAGGGGAGACACCGTCGCTCCTACCGACTCCTCAGTATCAAACCCTAACCCTAATCCTAACCCCAGCCCAAACCCTAAGACCTCTGCCTACTATGAGACCAGAGCAGCACACCACGGCGTTGTCACCAGCGACTGGCTGGCCCAGGCTCAGGCCGCCATTGGGCCGGACCCTGATCCTCTACCTCAACTCAGGCCCGATCCTGACAAGCCATTCAGCGTCATCAACGAGTTTAATGACTGGCGAAAACAGCCCCATTTGGCGGAGGCCGTCGCCGCCATTCGCGCCTTGGCCGCCGTGATAAGGACCAGCCAAGCTACCACCATGATGCAGCTGGAAATCGAGCTGAAGAAGGCCTCCGATACTCTGAAGTCGTGGGATGCCACCTCTATCTCTTTGACAGCGGGCTGTGATCTCTTCATGCGATATGTCACTCGGACTTCTGCTTTAGAATACGAAGACTTCAATTCCGCTAAATCTCGCTTGATTGAGCGTGCCGAGAAGTTCGGCGAAATCTCCTACAAGGCCCGCAAAGTTATCGCAATGTTGAGTCAGGATTTTATATTTGATGGTTGCACAATTTTGGTTCATGGTTTTTCCAGAGTTGTGTTTGAAGTCCTTAAATTGGCAGCACAAAACAAGAAATTATTTCGGGTCTTCTGCACAGAGGGAAGACCAGATCGAACAGGATTGCGGTTGTCCAATGAGCTGGCCAAGCTTGATGTTCCTGTGAAACTACTAATAGATTCTGCTGTGGCATATACTATGGATGAGGTGGACATGGTTTTCGTAGGTGCAGATGGAGTTGTGGAAAGTGGGGGCATAATCAACATGATGGGAACCTACCAAATTGCATTGGTTGCACACGGTATGAATAAACCAGTTTATGTCGCCGCTGAAAGCTACAAGTTTGCTCGTCTCTACCCTCTTGACCAAAAGGATTTAGCCCCTGCTTTACGCCCTATTGATTTCGGTGTACCTATTCCATCCAAGGTTGAGGTTGAAAGGTCCGCGCGGGACTACACCCCTCCTCAATACCTGACTCTGCTTTTCACAGATTTAGGTGTTCTTACTCCATCTGTTGTCAGTGATGAGCTGATCCAGCTATACTTATAG 1170 0.4991 MWWRSASFIMDRQQNEAALRGDTVAPTDSSVSNPNPNPNPSPNPKTSAYYETRAAHHGVVTSDWLAQAQAAIGPDPDPLPQLRPDPDKPFSVINEFNDWRKQPHLAEAVAAIRALAAVIRTSQATTMMQLEIELKKASDTLKSWDATSISLTAGCDLFMRYVTRTSALEYEDFNSAKSRLIERAEKFGEISYKARKVIAMLSQDFIFDGCTILVHGFSRVVFEVLKLAAQNKKLFRVFCTEGRPDRTGLRLSNELAKLDVPVKLLIDSAVAYTMDEVDMVFVGADGVVESGGIINMMGTYQIALVAHGMNKPVYVAAESYKFARLYPLDQKDLAPALRPIDFGVPIPSKVEVERSARDYTPPQYLTLLFTDLGVLTPSVVSDELIQLYL 389
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun9g00021 389 Coils Coil 127 147 - -
Viun9g00021 389 Gene3D - 192 389 IPR042529 -
Viun9g00021 389 PANTHER TRANSLATION INITIATION FACTOR EIF-2B SUBUNIT ALPHA 56 389 - -
Viun9g00021 389 FunFam Translation initiation factor eIF-2B subunit alpha 88 190 - -
Viun9g00021 389 Pfam Initiation factor 2 subunit family 104 377 IPR000649 GO:0044237
Viun9g00021 389 SUPERFAMILY NagB/RpiA/CoA transferase-like 104 388 IPR037171 -
Viun9g00021 389 Gene3D - 89 190 IPR042528 -
Viun9g00021 389 MobiDBLite consensus disorder prediction 19 48 - -
Viun9g00021 389 FunFam Translation initiation factor eIF-2B subunit alpha 193 389 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun9g00021 Viun-Chr9 142110 145193 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun9g00021 1 389 Eukaryotic Initiation Factors Gene Family AT1G53880 79.747 0.0 608
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun9g00021 K03239 - gmx:100799015 663.685