Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun9g00015 ATGGCGAAGGGAGGAGAGAAATGCAATGAGGAGTTGTATGAGGTTCTGGGCATAGAGAAGGAGTGTACCCCATCTGAGCTCAAGAATGCCTATAAGAAACTTGCACTGAAATGGCACCCAGATCGTTGTTCAGGGAGCCACGAGGAAGAAGGGAAGAAGAAGTTCCAGGCAATCCAGCACGCCTATTCTGTCTTATCTGACGCCAACACAAGGTTACTGTACGACGTAGGTGTCTATGACAGCGATGACGACCAAACCGGCATGGGTGATTTCTTGAATGAAATGGCCACAATGATGAGTCAATCAAAACCCATTGACAATGGGGAGGAGAGTTTTGAGGAGTTCCAACAGCTCTTTGGAGAAATGTTTCAAGCCACTGCACCTGCTTCACCTACGTACATCATGACTAATGGTGAAGGTTCTAGATCAAATAGACGTAATTCCACTGAAATTAATTTTGGAAAGACAGAAAATACATCCGAACTCAATCCCAGCGACCAGAACTTCTGCTTAGGGGCTCTGGTCGTAAAGATTCTGAACTTCCTAGCTGTGCAATTGCATCTCAATTGTTGTCCATGTCATGGTTGTGATGTCATTTTCTATTAA 606 0.4472 MAKGGEKCNEELYEVLGIEKECTPSELKNAYKKLALKWHPDRCSGSHEEEGKKKFQAIQHAYSVLSDANTRLLYDVGVYDSDDDQTGMGDFLNEMATMMSQSKPIDNGEESFEEFQQLFGEMFQATAPASPTYIMTNGEGSRSNRRNSTEINFGKTENTSELNPSDQNFCLGALVVKILNFLAVQLHLNCCPCHGCDVIFY 201
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun9g00015 201 ProSiteProfiles dnaJ domain profile. 11 78 IPR001623 -
Viun9g00015 201 PANTHER PUTATIVE, EXPRESSED-RELATED 4 139 - -
Viun9g00015 201 Pfam DnaJ domain 12 75 IPR001623 -
Viun9g00015 201 ProSitePatterns Nt-dnaJ domain signature. 55 74 IPR018253 -
Viun9g00015 201 PRINTS DnaJ domain signature 31 46 IPR001623 -
Viun9g00015 201 PRINTS DnaJ domain signature 13 31 IPR001623 -
Viun9g00015 201 PRINTS DnaJ domain signature 50 70 IPR001623 -
Viun9g00015 201 CDD DnaJ 11 67 IPR001623 -
Viun9g00015 201 SUPERFAMILY Chaperone J-domain 11 91 IPR036869 -
Viun9g00015 201 SMART dnaj_3 10 70 IPR001623 -
Viun9g00015 201 Gene3D DnaJ domain 8 131 IPR036869 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun9g00015 Viun-Chr9 126684 129253 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun9g00015 13 75 C2H2 Transcription Factor Family AT1G74250 48.485 2.84e-14 68.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun9g00015 - - lja:Lj3g3v2576120.1 223.402