Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun9g00014 ATGGCGAAGGGAGGAGAGAAATGCAATGAGGAGTTGTATGAGGTTCTGGGCATAGAGAAGGAGTGTACCCCATCTGAGCTCAAGAATGCCTATAAGAAACTTGCACTGAAATGGCACCCAGATCGTTGTTCAGGGAGCCACGAGGAAGAAGGGAAGAAGAAGTTCCAGGCAATCCAGCACGCCTATTCTGTCTTATCTGACGCCAACACAAGGTTACTGTACGACGTAGGTGTCTATGACAGCGATGACGACCAAACCGGCATGGGTGATTTCTTGAATGAAATGGCCACAATGATGAGTCAATCAAAACCCATTGACAATGGGGAGGAGAGTTTTGAGGAGTTCCAACAGCTCTTTGGAGAAATGTTTCAAGCCACTGCACCTGCTTCACCTACGTACATCATGACTAATGGTGAAGGTTCTAGATCAAATAGACGTAATTCCACTGAAATTAATTTTGGAAAGACAGAAAATACATCCGAACTCAATCCCAGCGACCAGAACTTCTGCTTAGGGGGAGGTGGAGCAGCTCCAAGATATGAAGAAGGGAGCTCCATGAGGAGGAGTTAG 570 0.4649 MAKGGEKCNEELYEVLGIEKECTPSELKNAYKKLALKWHPDRCSGSHEEEGKKKFQAIQHAYSVLSDANTRLLYDVGVYDSDDDQTGMGDFLNEMATMMSQSKPIDNGEESFEEFQQLFGEMFQATAPASPTYIMTNGEGSRSNRRNSTEINFGKTENTSELNPSDQNFCLGGGGAAPRYEEGSSMRRS 189
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun9g00014 189 PRINTS DnaJ domain signature 13 31 IPR001623 -
Viun9g00014 189 PRINTS DnaJ domain signature 50 70 IPR001623 -
Viun9g00014 189 PRINTS DnaJ domain signature 31 46 IPR001623 -
Viun9g00014 189 PANTHER PUTATIVE, EXPRESSED-RELATED 4 142 - -
Viun9g00014 189 ProSiteProfiles dnaJ domain profile. 11 78 IPR001623 -
Viun9g00014 189 MobiDBLite consensus disorder prediction 136 167 - -
Viun9g00014 189 Gene3D DnaJ domain 8 131 IPR036869 -
Viun9g00014 189 MobiDBLite consensus disorder prediction 136 189 - -
Viun9g00014 189 ProSitePatterns Nt-dnaJ domain signature. 55 74 IPR018253 -
Viun9g00014 189 CDD DnaJ 11 67 IPR001623 -
Viun9g00014 189 Pfam DnaJ domain 12 75 IPR001623 -
Viun9g00014 189 SUPERFAMILY Chaperone J-domain 11 91 IPR036869 -
Viun9g00014 189 SMART dnaj_3 10 70 IPR001623 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun9g00014 Viun-Chr9 126451 129138 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun9g00014 13 75 C2H2 Transcription Factor Family AT1G74250 48.485 2.61e-14 68.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun9g00014 - - lja:Lj3g3v2576120.1 234.958