LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Viun9g00009	ATGTCTGGAGCAGAAGGAGAAACAGAAACAGGTGTAACAGCAGAGGCAGAGAAGAACCCTAAGCTGAAAGAGCGAAAGGTATCATGGGCAAAACTAAGGCGCATAGATTCTCTGAATTTAGAGGCTGGAAGAGTTTCTATGGTTACACACAACCCTCACAAGTTGGGGTGGAGAATAACTCTTAGCTTAGCATTTCAAAGCATAGGAGTTGTATATGGTGATATTGGGACATCACCCCTTTACGTATATGCCAGCACCTTCAACAATGGAATCAAGCATCAGGATGATATTCTGGGTGTCTTGTCCCTTATCATCTACACCATCCTCCTCATACCTATGATCAAATACGTCTTCATCGTATTGTGGGCTAACGACAATGGCAACGGTGGAGCCTTTGCACTGTATTCGTTGATATGTAGACACTTAAAAATGAGTTTGATTCCAAATGAACAACCAGAGGATAGGGAGCTTTCTAATTACAAACTAGAAACCCCATCTAGTCAGGTCAAACGTGCCCACAAACTAAAGCAGAAACTCGAGGCCAGTTATACTGCTCGAGTTCTACTTGTCTTTCTTGCAATACTGGGAACTTCCATGGTTATAGGAGATGGGATTCTTACTCCATCAATATCAGTTCTTTCAGCTGTAAGTGGGATCAGTAAATCATTAGGTCAAGATGCTGTTGTGGGAATCACAATTGCAATTTTGGTAGTCCTATTTTCTGTTCAACGATTCGGCACTGATAAAGTGGGGTTTTCATTTGCTCCAATTATTTTGGTGTGGTTTATGTTCATCGGTGGAATTGGTTTTTACAACTTATTCAAATATGACATTGGAGTATTACGTGCCTTTTATCCAAAATATATATTTGATTACTTCAAACGGAATGGAAAGAATGGATGGTTATCACTTGGTGGAGTTTTTTTATGCATAACAGGATCCGAGGCTATGTTTGCTGACTTGGGCCACTTTAATGTACGAGCCATTCAAATAAGCTTTTCTTTCATTACATGTCCATCAATAGTGGTTGCATATATTGGGCAAGCAGCATATTTGAGGAAGTTTCCTGAGAATGTAGCTAATACTTTCTATGATTGCATTCCAGGTCCCTTATATTGGCCAACTTTTGTTGTGGCTGTTGCTGCGGCCATCATAGCTAGCCAAGCAATGATTTCAGGAGCTTTCTCCATCATATCCCAGGCACTAAGTCTAGGTTGTTTTCCAAGGGTTAGGGTGGTGCACACTTCCATCAATCATCAGGGTCAGGTGTATATCCCTGAAATCAACTACATGTTCATGATCGCATGTATTGTGGTGTGTGCTGCCTTCAAGACCACAGACAACATTAGTCATGCATATGGGATTGCAGTTATTGGTGATATGATGATTTCAACAACTCTGGTTTCGCTGATAATGCTTGTTTTATGGAAGAAGAGTTTGTGGCGTGTGGCTTTGTTCTTCTTTGGATTCGGTTTCGTTGAATTAGTTTATTTATCATCTCAACTGACCAAGTTCACAGGAGGAGGGTATTTTCCAATTGTATCAGCTATGTTCCTGACGACGGTAATGGGAACCTGGCACTATGTGCACAAAGAAAGATACATGTTTGAGTTAAAAAACAAGGTATCAAGCGCATATCTGAATGAATTAGCAAACAACCCAGACGTAAGGCGAGTGCCAGGAATTGGGCTTTTGTATTCTGAGCTGGTGCAAGGCATTCCCCCCATATTCCCACACCTTATAGGTAGCATCCCATCTGTCCATTCAATTCTTGTGTTTGTGTCTATTAAAGCTATTCCGGTGAGTAGTGTTGCATCGGAGGAGAGGTTCTTGTTTCGGCAAGTGGAGCCAAGAGAGTACAGGGTGTTTCGCTGTGTTGTGAGGCATGGTTACAATGATGTGGTTGGAGATCCTGCAGAGTTTGAGTCACAATTGATACAAAATTTAAAGGCATTCATTGAAGAAAAGAACTATTATACGGTGGAGGTGGAGGTGGAGGGAAGTGGAAATGCAATCGAACAAGCAGCAGTGGTTGAAAGCAGTGATCAGAGGGAAGCACATCGTTCCTCCAGCAAAATAATCCCAAATCAATCAGCATCGGCCTCATCTGACTCCATTCGATCATTAGGGGGGAGTGGCACCAAGTCATCTGCTAACTTCCTTGCCCCACCCATCCATGGAGCTGAAGAGGAACTCAAATTCATTGAAAAAGCATCGGAGAAAGGCGTGGTGTACATGCTGGCAGAAGCAGAGGTTGTGGCTCACCCAAACTCCTCCATCATCAATAAGATCATTGTCAATTATGTGTACAGTTTCTTCAGAAAGAACTTCAGACAAGGCCAGAGTTCCATGGCTATCCCCCGCAACAGACTTCTCAAGGTTGGAATGACGTATGAAATATGA	2403	0.4232	MSGAEGETETGVTAEAEKNPKLKERKVSWAKLRRIDSLNLEAGRVSMVTHNPHKLGWRITLSLAFQSIGVVYGDIGTSPLYVYASTFNNGIKHQDDILGVLSLIIYTILLIPMIKYVFIVLWANDNGNGGAFALYSLICRHLKMSLIPNEQPEDRELSNYKLETPSSQVKRAHKLKQKLEASYTARVLLVFLAILGTSMVIGDGILTPSISVLSAVSGISKSLGQDAVVGITIAILVVLFSVQRFGTDKVGFSFAPIILVWFMFIGGIGFYNLFKYDIGVLRAFYPKYIFDYFKRNGKNGWLSLGGVFLCITGSEAMFADLGHFNVRAIQISFSFITCPSIVVAYIGQAAYLRKFPENVANTFYDCIPGPLYWPTFVVAVAAAIIASQAMISGAFSIISQALSLGCFPRVRVVHTSINHQGQVYIPEINYMFMIACIVVCAAFKTTDNISHAYGIAVIGDMMISTTLVSLIMLVLWKKSLWRVALFFFGFGFVELVYLSSQLTKFTGGGYFPIVSAMFLTTVMGTWHYVHKERYMFELKNKVSSAYLNELANNPDVRRVPGIGLLYSELVQGIPPIFPHLIGSIPSVHSILVFVSIKAIPVSSVASEERFLFRQVEPREYRVFRCVVRHGYNDVVGDPAEFESQLIQNLKAFIEEKNYYTVEVEVEGSGNAIEQAAVVESSDQREAHRSSSKIIPNQSASASSDSIRSLGGSGTKSSANFLAPPIHGAEEELKFIEKASEKGVVYMLAEAEVVAHPNSSIINKIIVNYVYSFFRKNFRQGQSSMAIPRNRLLKVGMTYEI	800

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Viun9g00009	800	Pfam	K+ potassium transporter	64	633	IPR003855	GO:0015079\|GO:0016020\|GO:0071805
	Viun9g00009	800	PANTHER	OSMOTIC STRESS POTASSIUM TRANSPORTER	56	799	IPR003855	GO:0015079\|GO:0016020\|GO:0071805
	Viun9g00009	800	NCBIfam	potassium uptake protein	63	800	IPR003855	GO:0015079\|GO:0016020\|GO:0071805
	Viun9g00009	800	MobiDBLite	consensus disorder prediction	679	711	-	-
	Viun9g00009	800	MobiDBLite	consensus disorder prediction	690	711	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Viun9g00009	Viun-Chr9	101551	107824	Transposed

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Viun9g00009	1	800	Inorganic Solute Cotransporters	AT4G13420	56.500	0.0	934

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Viun9g00009	K03549		-	gmx:100814313	1283.86