Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun8g03173 ATGGGCAACACATGCCGCGGATCTTTGAAAGGGAAATATATTCAGGAGGGCTACAGCCAGCCCGAAGACCACTCCAAGCGCACCACCCTTTCTGATCGCTCCGACTCCGAACACCCCTCCTCAACCAGACAAAATATCAATTCTGCAGAAAACAACAACAGCAACAGCACCAACGTCAACAACAACAACAACAACAATCCACCCTTCAACTCCAAGAAAGACTCCATCATGCGCCGCGGTCTTGACAACCAGGCATATTATGTCTTGGGCCATAAGACTCCCAACATTCGTGATCTATACACGCTTGGCCGCAAATTGGGACAGGGGCAATTTGGCACCACTTATTTATGCACCGAGAATTCTACTTCCAATGAATATGCCTGCAAATCCATCTCCAAAAGAAAGTTGATTTCTAAGGAGGACGTTGAGGATGTCAGGAGGGAAATTCAGATAATGCATCATTTGGCTGGTCACAAGAACATTGTCACCATTAAGGGTGCTTACGAGGATCCTCTCTATGTGCATATAGTCATGGAGCTTTGTTCTGGGGGTGAGTTGTTTGATCGCATCATCCAGAGGGGCCACTATACCGAGAGGAAGGCTGCAGAGTTGACCAAAATTATTGTTGGGGTTGTTGAGGCTTGTCATTCCCTTGGGGTCATGCATAGAGATCTCAAGCCAGAAAACTTTCTGTTGGTCAATAAAGATGATGATTTCTCTCTTAAAGCAATTGACTTTGGCCTCTCCGTTTTCTTCAAACCCGGTCAAGTTTTCACTGATGTAGTCGGCAGCCCATACTATGTTGCTCCTGAGGTTCTCCTCAAGCATTATGGGCCTGAAGCAGACGTGTGGACAGCGGGTGTCATACTGTACATACTGCTTAGTGGTGTACCACCATTTTGGGCAGAGACCCAACAGGGTATATTTGATGCAGTATTGAAGGGACATATAGATTTTGACTCAGATCCTTGGCCTCTAATATCTGACAGTGGAAAAGATCTGATCAGAAAGATGCTGTGTTCTCAGCCTTCAGAACGGTTGACTGCTCATCAAGTGTTATGTCATCCTTGGATATGTGAAAATGGAGTTGCACCTGACAGAGCAATAGACCCTGCTGTTCTTTCTCGTCTTAAACAGTTTTCTGCAATGAATAAGCTAAAGAAGATGGCATTGCGGGTGATTGCTGAAAGTCTATCTGAAGAGGAGATTGCTGGTTTGAGAGAAATGTTTCAGGCTATGGATACCGATAACAGTGGTGCAATCACTTTTGATGAACTCAAAGCTGGTCTAAGAAGATATGGGTCCACCCTTAAAGATGTAGAAATACGTGATCTGATGGAAGCGGCTGATGTCGACAAAAGTGGGACCATAGATTATGGGGAGTTTATTGCTGCTACCGTTCATCTCAACAAACTAGAACGTGAAGAACATCTTATTGCAGCATTCCAATATTTTGACAAGGATGGAAGTGGTTATATTACGGTTGATGAACTTCAACAAGCTTGTGCAGAACATAACATGACTGATGCTTTTCTTGAAGATATTATTAGGGAAGTTGATCAAGATAATGATGGAAGGATTGATTATGGTGAATTTGCTGCAATGATGCAAAAAGGCAATGCTGGAATTGGTAGGAGGACTATGCGCAATAGTCTGAATTTAAGCATGAGGGACGCATCAAGTGCTCAATAG 1692 0.4391 MGNTCRGSLKGKYIQEGYSQPEDHSKRTTLSDRSDSEHPSSTRQNINSAENNNSNSTNVNNNNNNNPPFNSKKDSIMRRGLDNQAYYVLGHKTPNIRDLYTLGRKLGQGQFGTTYLCTENSTSNEYACKSISKRKLISKEDVEDVRREIQIMHHLAGHKNIVTIKGAYEDPLYVHIVMELCSGGELFDRIIQRGHYTERKAAELTKIIVGVVEACHSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFFKPGQVFTDVVGSPYYVAPEVLLKHYGPEADVWTAGVILYILLSGVPPFWAETQQGIFDAVLKGHIDFDSDPWPLISDSGKDLIRKMLCSQPSERLTAHQVLCHPWICENGVAPDRAIDPAVLSRLKQFSAMNKLKKMALRVIAESLSEEEIAGLREMFQAMDTDNSGAITFDELKAGLRRYGSTLKDVEIRDLMEAADVDKSGTIDYGEFIAATVHLNKLEREEHLIAAFQYFDKDGSGYITVDELQQACAEHNMTDAFLEDIIREVDQDNDGRIDYGEFAAMMQKGNAGIGRRTMRNSLNLSMRDASSAQ 563
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun8g03173 563 Pfam Protein kinase domain 100 358 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun8g03173 563 FunFam Calcium-dependent protein kinase 1 366 540 - -
Viun8g03173 563 MobiDBLite consensus disorder prediction 17 39 - -
Viun8g03173 563 ProSitePatterns EF-hand calcium-binding domain. 520 532 IPR018247 -
Viun8g03173 563 ProSitePatterns Protein kinases ATP-binding region signature. 106 129 IPR017441 GO:0005524
Viun8g03173 563 SMART efh_1 511 539 IPR002048 GO:0005509
Viun8g03173 563 SMART efh_1 405 433 IPR002048 GO:0005509
Viun8g03173 563 SMART efh_1 441 469 IPR002048 GO:0005509
Viun8g03173 563 SMART efh_1 477 505 IPR002048 GO:0005509
Viun8g03173 563 MobiDBLite consensus disorder prediction 40 72 - -
Viun8g03173 563 Pfam EF-hand domain pair 406 466 IPR002048 GO:0005509
Viun8g03173 563 Pfam EF-hand domain pair 476 537 IPR002048 GO:0005509
Viun8g03173 563 ProSitePatterns EF-hand calcium-binding domain. 486 498 IPR018247 -
Viun8g03173 563 FunFam Calcium-dependent protein kinase 5 186 366 - -
Viun8g03173 563 ProSiteProfiles EF-hand calcium-binding domain profile. 437 472 IPR002048 GO:0005509
Viun8g03173 563 ProSiteProfiles EF-hand calcium-binding domain profile. 509 542 IPR002048 GO:0005509
Viun8g03173 563 ProSiteProfiles EF-hand calcium-binding domain profile. 473 508 IPR002048 GO:0005509
Viun8g03173 563 FunFam Calcium-dependent protein kinase 1 102 185 - -
Viun8g03173 563 ProSitePatterns EF-hand calcium-binding domain. 450 462 IPR018247 -
Viun8g03173 563 ProSitePatterns Serine/Threonine protein kinases active-site signature. 220 232 IPR008271 GO:0004672|GO:0006468
Viun8g03173 563 ProSiteProfiles EF-hand calcium-binding domain profile. 401 436 IPR002048 GO:0005509
Viun8g03173 563 SMART serkin_6 100 358 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun8g03173 563 SUPERFAMILY EF-hand 382 539 IPR011992 -
Viun8g03173 563 Gene3D Phosphorylase Kinase; domain 1 102 185 - -
Viun8g03173 563 PANTHER SERINE/THREONINE-PROTEIN KINASE 92 532 - -
Viun8g03173 563 ProSitePatterns EF-hand calcium-binding domain. 414 426 IPR018247 -
Viun8g03173 563 Gene3D - 368 540 - -
Viun8g03173 563 SUPERFAMILY Protein kinase-like (PK-like) 78 382 IPR011009 -
Viun8g03173 563 CDD STKc_CAMK 100 357 - -
Viun8g03173 563 CDD EFh 477 537 IPR002048 GO:0005509
Viun8g03173 563 Gene3D Transferase(Phosphotransferase) domain 1 186 367 - -
Viun8g03173 563 MobiDBLite consensus disorder prediction 1 75 - -
Viun8g03173 563 ProSiteProfiles Protein kinase domain profile. 100 358 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun8g03173 Viun-Chr8 38204640 38213643 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun8g03173 1 559 EF-hand Containing Proteins AT2G17290 82.857 0.0 957
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Viun8g03173 Pkinase 4.4e-73 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun8g03173 K13412 - gmx:100778173 1031.17