Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun8g03097 ATGGCAGAGAAAAGCATGAAAGAGGGAAGTGCAGAGGTAGTATCTGATGAAGAAGCTTATCTATTCGCCATGGAACTAGCTGGTGCTTCTGCTGTTCCCATGGTTCTGAAATCAGCTCTGGAACTTGGCATCTTAGAAACCATAGCAAAGGCTGGTCCTGGAACTTTCCTTTCTCCTTCTCAGATAGCGTCTCAGATCCCAAATATAAAGAACCCTTATGCACCTGCTATGTTGGACCGCATGTTTCGCCTTTTGGTTAGCTACAACATCCTCACAGTTCAATTCCATGACGGTGATGAGGCTGAAAGGTTCTATGGTCTTCACCCGAAAGCCAAATACTTGGTCAACAATGAAGATGGCGTGTCTGTGGCTGCTTACTTTCTCATGGAACAAGACAAAGTCCTCAAGGAAATGTGGTACAAGTTGACAGAATCAGTTGAGGAGAGTGGATTTCCATTTCAGAATGCTTATGGAATGAATCTGTTTGAGTTCCATGACGCAAATCCAAGATTTAACGGGCTTTTCAATAAGGGTTTGTCTGATTGCTCTAGCATCACAATGAAGAAAATTCTCGACACCTACGAAGGATTTGAGGGTGTTGGATCTTTGGTCGATGTTGGCGGTGGAACCGGTGCTATCATCAGCATGATTGCTTCCAAGTATTCATCCATGAAGTGTGTTAATTTTGACTTACCCCACGTCATTAAAGAAGCTCCACCTTACACAGGTGTGGAACATGTAGGTGGAGACATGTTCGTGAGTGTTCCAAAAGCTGACGCCATTTTCATGAAGTGGGTATGTCATGACTGGAGTGACGAGCAATGCTTGAAACTGTTGAAGAAGTGTTATGATTCTGTTCCTGACACTGGAAAGGTGATTTTGGTTGAAGGGCTTATTCCAGAAACACCAGATTCTAAGTTAGCTTCAAAGTGTGAGTTTCAAATGGATATTGTGATGTTGTGTCACAGTCCAAATGGGAAAGAGAGAACAGAGAAAGAGTACGAGGCTTTGGCTAAAGGAGCTGGATTCCATGGTTTCAGAATAGCATGTTGCGTTTTCAATACTTACGTTATGGAGTTCCTTAAAAAGGCTTAG 1095 0.4301 MAEKSMKEGSAEVVSDEEAYLFAMELAGASAVPMVLKSALELGILETIAKAGPGTFLSPSQIASQIPNIKNPYAPAMLDRMFRLLVSYNILTVQFHDGDEAERFYGLHPKAKYLVNNEDGVSVAAYFLMEQDKVLKEMWYKLTESVEESGFPFQNAYGMNLFEFHDANPRFNGLFNKGLSDCSSITMKKILDTYEGFEGVGSLVDVGGGTGAIISMIASKYSSMKCVNFDLPHVIKEAPPYTGVEHVGGDMFVSVPKADAIFMKWVCHDWSDEQCLKLLKKCYDSVPDTGKVILVEGLIPETPDSKLASKCEFQMDIVMLCHSPNGKERTEKEYEALAKGAGFHGFRIACCVFNTYVMEFLKKA 364
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun8g03097 364 FunFam Caffeic acid O-methyltransferase 115 362 - -
Viun8g03097 364 FunFam Caffeic acid 3-O-methyltransferase 2 114 - -
Viun8g03097 364 PIRSF O-mtase 1 362 IPR016461 GO:0008168
Viun8g03097 364 CDD AdoMet_MTases 203 295 - -
Viun8g03097 364 Pfam Dimerisation domain 34 86 IPR012967 GO:0046983
Viun8g03097 364 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 120 360 IPR029063 -
Viun8g03097 364 SUPERFAMILY "Winged helix" DNA-binding domain 16 118 IPR036390 -
Viun8g03097 364 PANTHER O-METHYLTRANSFERASE 23 346 IPR016461 GO:0008168
Viun8g03097 364 Gene3D - 1 114 IPR036388 -
Viun8g03097 364 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 24 362 IPR016461 GO:0008168
Viun8g03097 364 Pfam O-methyltransferase domain 139 343 IPR001077 GO:0008171
Viun8g03097 364 Gene3D Vaccinia Virus protein VP39 115 362 IPR029063 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun8g03097 Viun-Chr8 37870661 37872417 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun8g03097 14 363 Monolignol Biosynthesis Gene Families AT5G54160 60.511 3.83e-159 449
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun8g03097 K13066 - gmx:100780100 484.567